RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 SPAG17Q6Q759 2223 aa9.49□□□□□ -0.89
NUP50-206ENST00000422489 MYO18AQ92614 2054 aaKnown RBP9.49□□□□□ -0.89
NUP50-206ENST00000422489 PRAMEF26H0Y7S4 382 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 RNF103O00237 685 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 TNFSF14O43557 240 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 LATO43561 262 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 PCDHGA12O60330 932 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 LEFTY1O75610 366 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 ZMPSTE24O75844 475 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 PRLRP16471 622 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 ARRB1P49407 418 aaPredicted RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 SERPINH1P50454 418 aaKnown RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 HDAC4P56524 1084 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 NXPH1P58417 271 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 BNIP3Q12983 259 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 INAVAQ3KP66 663 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 SETMARQ53H47 684 aaPredicted RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 AGBL4Q5VU57 503 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 NAPEPLDQ6IQ20 393 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 FBXL19Q6PCT2 694 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 ERN2Q76MJ5 926 aaKnown RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 APTXQ7Z2E3 356 aaKnown RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 IRF2BP2Q7Z5L9 587 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 GLRX5Q86SX6 157 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 PYROXD2Q8N2H3 581 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 EID2Q8N6I1 236 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 MFSD2AQ8NA29 543 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 CENPIQ92674 756 aaPredicted RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 ARHGEF2Q92974 986 aaKnown RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 TBC1D31Q96DN5 1066 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 KLHDC7BQ96G42 594 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 PPP1R16AQ96I34 528 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 HEPHQ9BQS7 1158 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 CEP44Q9C0F1 390 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 HSD3B7Q9H2F3 369 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 PREBQ9HCU5 417 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 RTN4Q9NQC3 1192 aaKnown RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 NDFIP2Q9NV92 336 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 ARHGAP20Q9P2F6 1191 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 HECAQ9UBI9 543 aaPredicted RBP9.48□□□□□ -0.89
NUP50-206ENST00000422489 FTSJ1Q9UET6 329 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 DMTF1Q9Y222 760 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 CA5BQ9Y2D0 317 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 SPTBN2O15020 2390 aa9.48□□□□□ -0.89
NUP50-206ENST00000422489 LRRC53A6NM62 1247 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 KRIT1O00522 736 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 CCP110O43303 1012 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 BUB1O43683 1085 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 CREB3O43889 395 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 MAGEC1O60732 1142 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 RAMP2O60895 175 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 LRIG2O94898 1065 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 LDOC1O95751 146 aaPredicted RBP9.47□□□□□ -0.89
NUP50-206ENST00000422489 SERPINC1P01008 464 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 DESP17661 470 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 EPHB2P29323 1055 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 GKP32189 559 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 NUDT1P36639 197 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 ETFBP38117 255 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 MAPKAPK2P49137 400 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 CCNHP51946 323 aaPredicted RBP9.47□□□□□ -0.89
NUP50-206ENST00000422489 ZNF143P52747 638 aaPredicted RBP9.47□□□□□ -0.89
NUP50-206ENST00000422489 TAS2R38P59533 333 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 RPL7AP62424 266 aaKnown RBP9.47□□□□□ -0.89
NUP50-206ENST00000422489 ARF5P84085 180 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 POLD3Q15054 466 aaPredicted RBP9.47□□□□□ -0.89
NUP50-206ENST00000422489 SHBQ15464 509 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 ASIC2Q16515 512 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 EFHC2Q5JST6 749 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 ARTNQ5T4W7 220 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 PIP5KL1Q5T9C9 394 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 MON1BQ7L1V2 547 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 TRIM69Q86WT6 500 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 SPATS2Q86XZ4 545 aaKnown RBP9.47□□□□□ -0.89
NUP50-206ENST00000422489 MARCH9Q86YJ5 346 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 MCOLN2Q8IZK6 566 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 PCDH20Q8N6Y1 951 aaKnown RBP9.47□□□□□ -0.89
NUP50-206ENST00000422489 C3orf20Q8ND61 904 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 OR6K2Q8NGY2 324 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 GATA6Q92908 595 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 MCEEQ96PE7 176 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 TM6SF2Q9BZW4 377 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 MAGEH1Q9H213 219 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 ZDHHC6Q9H6R6 413 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 FZD3Q9NPG1 666 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 TMEM248Q9NWD8 314 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 ZNF212Q9UDV6 495 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 NUP205Q92621 2012 aa9.47□□□□□ -0.89
NUP50-206ENST00000422489 TNRC6BQ9UPQ9 1833 aaKnown RBP9.47□□□□□ -0.89
NUP50-206ENST00000422489 PLXND1Q9Y4D7 1925 aa9.46□□□□□ -0.89
NUP50-206ENST00000422489 FAM221BA6H8Z2 402 aa9.46□□□□□ -0.9
NUP50-206ENST00000422489 TMEM8BA6NDV4 472 aa9.46□□□□□ -0.9
NUP50-206ENST00000422489 NEMP1O14524 444 aa9.46□□□□□ -0.9
NUP50-206ENST00000422489 DAPK3O43293 454 aa9.46□□□□□ -0.9
NUP50-206ENST00000422489 KDELR3O43731 214 aa9.46□□□□□ -0.9
NUP50-206ENST00000422489 ZNF821O75541 412 aaPredicted RBP9.46□□□□□ -0.9
NUP50-206ENST00000422489 CD160O95971 181 aa9.46□□□□□ -0.9
NUP50-206ENST00000422489 PAK4O96013 591 aaPredicted RBP9.46□□□□□ -0.9
NUP50-206ENST00000422489 THEGLP0DJG4 465 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms