RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 ARF5P84085 180 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 OGDHQ02218 1023 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 CNTN1Q12860 1018 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 HNRNPDQ14103 355 aaKnown RBP15.64■□□□□ 0.09
NUP50-204ENST00000417702 POLD3Q15054 466 aaPredicted RBP15.64■□□□□ 0.09
NUP50-204ENST00000417702 KIF19Q2TAC6 998 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 HLA-BQ31612 363 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 PIP4P1Q86T03 277 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 ZNF354CQ86Y25 554 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 PYROXD2Q8N2H3 581 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 PCDH20Q8N6Y1 951 aaKnown RBP15.64■□□□□ 0.09
NUP50-204ENST00000417702 RTL3Q8N8U3 475 aaKnown RBP15.64■□□□□ 0.09
NUP50-204ENST00000417702 SYN2Q92777 582 aaPredicted RBP15.64■□□□□ 0.09
NUP50-204ENST00000417702 ARHGEF2Q92974 986 aaKnown RBP15.64■□□□□ 0.09
NUP50-204ENST00000417702 FAM131CQ96AQ9 280 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 ZNF653Q96CK0 615 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.64■□□□□ 0.09
NUP50-204ENST00000417702 TNKS2Q9H2K2 1166 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 TSPY26PQ9H489 355 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 CATSPERBQ9H7T0 1116 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 AASDHPPTQ9NRN7 309 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 NDFIP2Q9NV92 336 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 IFNKQ9P0W0 207 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 CNOT8Q9UFF9 292 aaKnown RBP15.64■□□□□ 0.09
NUP50-204ENST00000417702 ANKRD6Q9Y2G4 727 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 SCINQ9Y6U3 715 aa15.64■□□□□ 0.09
NUP50-204ENST00000417702 PLRG1O43660 514 aaKnown RBP15.63■□□□□ 0.09
NUP50-204ENST00000417702 RNF8O76064 485 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 CTSLP07711 333 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 ZNF883P0CG24 379 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 NUDT1P36639 197 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 ZBED6P86452 979 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 BNC1Q01954 994 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 SLC45A4Q5BKX6 768 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 CARD16Q5EG05 197 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 AGBL4Q5VU57 503 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 DPY19L3Q6ZPD9 716 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 PRPF39Q86UA1 669 aaKnown RBP15.63■□□□□ 0.09
NUP50-204ENST00000417702 DNAAF5Q86Y56 855 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 CHST14Q8NCH0 376 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 GRIN3AQ8TCU5 1115 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 FNIP1Q8TF40 1166 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 CPLX3Q8WVH0 158 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 PPP1R16AQ96I34 528 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 SLC6A18Q96N87 628 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 ORAI3Q9BRQ5 295 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 MRPL47Q9HD33 250 aaKnown RBP15.63■□□□□ 0.09
NUP50-204ENST00000417702 DONSONQ9NYP3 566 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 IL36AQ9UHA7 158 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 CAPN11Q9UMQ6 739 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 NEU3Q9UQ49 428 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 FCF1Q9Y324 198 aaKnown RBP15.63■□□□□ 0.09
NUP50-204ENST00000417702 LUC7L2Q9Y383 392 aaKnown RBP15.63■□□□□ 0.09
NUP50-204ENST00000417702 PCDHB9Q9Y5E1 797 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 SNX11Q9Y5W9 270 aa15.63■□□□□ 0.09
NUP50-204ENST00000417702 ACACBO00763 2458 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 TMEM191CA6NGB0 347 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 ZSCAN5CA6NGD5 496 aaPredicted RBP15.62■□□□□ 0.09
NUP50-204ENST00000417702 EIF3CLB5ME19 914 aaKnown RBP15.62■□□□□ 0.09
NUP50-204ENST00000417702 VILLO15195 856 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 FGF10O15520 208 aaPredicted RBP15.62■□□□□ 0.09
NUP50-204ENST00000417702 SH3BP5O60239 455 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 SERPING1P05155 500 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 PMLP29590 882 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 HTR7P34969 479 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 TPI1P60174 286 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 SUZ12Q15022 739 aaKnown RBP15.62■□□□□ 0.09
NUP50-204ENST00000417702 ARSIQ5FYB1 569 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 LAYNQ6UX15 382 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 ISG20Q96AZ6 181 aaKnown RBP15.62■□□□□ 0.09
NUP50-204ENST00000417702 SERAC1Q96JX3 654 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 EIF3CQ99613 913 aaKnown RBP15.62■□□□□ 0.09
NUP50-204ENST00000417702 NCAPGQ9BPX3 1015 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 HEPHQ9BQS7 1158 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 IL21RQ9HBE5 538 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 PREBQ9HCU5 417 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 TM7SF3Q9NS93 570 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 MYO1AQ9UBC5 1043 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 ANGPTL2Q9UKU9 493 aa15.62■□□□□ 0.09
NUP50-204ENST00000417702 FNDC3AQ9Y2H6 1198 aaKnown RBP15.62■□□□□ 0.09
NUP50-204ENST00000417702 NYNRINQ9P2P1 1898 aaKnown RBP15.61■□□□□ 0.09
NUP50-204ENST00000417702 WASH4PA8MWX3 477 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 C10orf142B7Z368 130 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 LATO43561 262 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 BUB1O43683 1085 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 KDELR3O43731 214 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 PRPSAP2O60256 369 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 ZNF821O75541 412 aaPredicted RBP15.61■□□□□ 0.09
NUP50-204ENST00000417702 LEFTY1O75610 366 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 YBEYP58557 167 aaPredicted RBP15.61■□□□□ 0.09
NUP50-204ENST00000417702 PPP2CBP62714 309 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 PPP2CAP67775 309 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 SIM1P81133 766 aaPredicted RBP15.61■□□□□ 0.09
NUP50-204ENST00000417702 HGSNATQ68CP4 663 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 ERN2Q76MJ5 926 aaKnown RBP15.61■□□□□ 0.09
NUP50-204ENST00000417702 TRIM69Q86WT6 500 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 NAXDQ8IW45 347 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 PLPP6Q8IY26 295 aa15.61■□□□□ 0.09
NUP50-204ENST00000417702 RYBPQ8N488 228 aaPredicted RBP15.61■□□□□ 0.09
NUP50-204ENST00000417702 SETD7Q8WTS6 366 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms