RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TSSK4Q6SA08 328 aa31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 ADAT2Q7Z6V5 191 aaKnown RBP31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 C1orf210Q8IVY1 113 aa31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 SUN2Q9UH99 717 aa31.15■■■□□ 2.58
CSNK1E-206ENST00000413574 ZNF318Q5VUA4 2279 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 APOC4-APOC2K7ER74 178 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 APOC2P02655 101 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 MX2P20592 715 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 NR2C2P49116 596 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 CLCN6P51797 869 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 SLC10A7Q0GE19 358 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 KLF1Q13351 362 aaPredicted RBP31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 STARD3Q14849 445 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 MAMSTRQ6ZN01 415 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 HDAC11Q96DB2 347 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 SLC6A17Q9H1V8 727 aa31.14■■■□□ 2.58
CSNK1E-206ENST00000413574 EDDM13A0A1B0GTR0 161 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 CXorf51AA0A1B0GTR3 108 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 TCRBV21S2A2A0A5A6 115 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 CEP104O60308 925 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 OTUD4Q01804 1114 aaKnown RBP31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 CAMK2GQ13555 558 aaPredicted RBP31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 INO80DQ53TQ3 878 aaPredicted RBP31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 ZC3H18Q86VM9 953 aaKnown RBP31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 LRRC49Q8IUZ0 686 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 MAML2Q8IZL2 1156 aaPredicted RBP31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 ACTL9Q8TC94 416 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 TSGA13Q96PP4 275 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 TM6SF2Q9BZW4 377 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 LAMTOR5O43504 91 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 DGKEP52429 567 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 PDK1Q15118 436 aa31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 SLC13A5Q86YT5 568 aaPredicted RBP31.13■■■□□ 2.57
CSNK1E-206ENST00000413574 K7ESF4 209 aa31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 CCNCP24863 283 aa31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 PXNP49023 591 aaPredicted RBP31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 PPIDQ08752 370 aaKnown RBP31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 AP1B1Q10567 949 aa31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 LBRQ14739 615 aaKnown RBP31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 CACUL1Q86Y37 369 aa31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 STK40Q8N2I9 435 aa31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 ZNF419Q96HQ0 510 aaPredicted RBP31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 EXOC2Q96KP1 924 aa31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 CEP44Q9C0F1 390 aa31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 R3HDM2Q9Y2K5 976 aaKnown RBP31.12■■■□□ 2.57
CSNK1E-206ENST00000413574 COPAP53621 1224 aa31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 NOMO1Q15155 1222 aa31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 ATXN7L2Q5T6C5 722 aaPredicted RBP31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 TSEN2Q8NCE0 465 aaKnown RBP31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 TSTD1Q8NFU3 115 aa31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 OR2A12Q8NGT7 310 aa31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 CASKIN2Q8WXE0 1202 aa31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 OSBPL9Q96SU4 736 aa31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 MKRN2Q9H000 416 aaKnown RBP31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 C10orf88Q9H8K7 445 aa31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 POLMQ9NP87 494 aaPredicted RBP31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 PRMT8Q9NR22 394 aaPredicted RBP31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 SNX12Q9UMY4 172 aa31.11■■■□□ 2.57
CSNK1E-206ENST00000413574 TARSL2A2RTX5 802 aaKnown RBP31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 PPP1R12AO14974 1030 aaPredicted RBP31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 RHOAP61586 193 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 TMCO4Q5TGY1 634 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 ANO7Q6IWH7 933 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 BZW1Q7L1Q6 419 aaKnown RBP31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 CCDC13Q8IYE1 715 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 CHST14Q8NCH0 376 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 COG1Q8WTW3 980 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 HMGB4Q8WW32 186 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 ISG20Q96AZ6 181 aaKnown RBP31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 MS4A14Q96JA4 679 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 ZNF599Q96NL3 588 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 LHX3Q9UBR4 397 aa31.1■■■□□ 2.57
CSNK1E-206ENST00000413574 KCNK1O00180 336 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 MATN3O15232 486 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 DMWDQ09019 674 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 PCDH20Q8N6Y1 951 aaKnown RBP31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 OR6K2Q8NGY2 324 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 FAM129BQ96TA1 746 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 NAPGQ99747 312 aaPredicted RBP31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 MUSKO15146 869 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 PAPSS2O95340 614 aaPredicted RBP31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 FGGP02679 453 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 GABRG2P18507 467 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 RGRP47804 291 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 CSTF1Q05048 431 aaKnown RBP31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 TIGD7Q6NT04 549 aaPredicted RBP31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 DPY19L3Q6ZPD9 716 aa31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 CINPQ9BW66 212 aaPredicted RBP31.09■■■□□ 2.57
CSNK1E-206ENST00000413574 ZNF185O15231 689 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 NDUFV2P19404 249 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 ETF1P62495 437 aaKnown RBP31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 RFTN1Q14699 578 aaPredicted RBP31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 PRKD1Q15139 912 aaPredicted RBP31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 CARD16Q5EG05 197 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 MARC1Q5VT66 337 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 NYAP1Q6ZVC0 841 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 METTL3Q86U44 580 aaKnown RBP31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 PGBD5Q8N414 524 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 MDGA1Q8NFP4 955 aa31.08■■■□□ 2.57
CSNK1E-206ENST00000413574 OR2T3Q8NH03 318 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms