RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 NCF1CA8MVU1 366 aaPredicted RBP14.24□□□□□ -0.13
SCAF4-202ENST00000399804 DGKIO75912 1065 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 RBP1P09455 135 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 NCF1P14598 390 aaPredicted RBP14.24□□□□□ -0.13
SCAF4-202ENST00000399804 RHOQP17081 205 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 TM4SF4P48230 202 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 GPR15P49685 360 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 UBR7Q8N806 425 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 TSEN34Q9BSV6 310 aaKnown RBP14.24□□□□□ -0.13
SCAF4-202ENST00000399804 UTP6Q9NYH9 597 aaKnown RBP14.24□□□□□ -0.13
SCAF4-202ENST00000399804 FBXO5Q9UKT4 447 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 E9PBE3 544 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 KLHL41O60662 606 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 PARNO95453 639 aaKnown RBP14.24□□□□□ -0.13
SCAF4-202ENST00000399804 LMNAP02545 664 aaKnown RBP14.24□□□□□ -0.13
SCAF4-202ENST00000399804 NQO1P15559 274 aaKnown RBP14.24□□□□□ -0.13
SCAF4-202ENST00000399804 GRAMD1BQ3KR37 738 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 TMCO4Q5TGY1 634 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 GBA3Q9H227 469 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 ARMCX1Q9P291 453 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 CCNCP24863 283 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 GABRR2P28476 465 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 ZBTB6Q15916 424 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 POTEHQ6S545 545 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 TEKT5Q96M29 485 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 SLC39A8Q9C0K1 460 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 CXorf56Q9H5V9 222 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 PLK2Q9NYY3 685 aa14.24□□□□□ -0.13
SCAF4-202ENST00000399804 EVPLQ92817 2033 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 A8MX80 341 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 FCHO1O14526 889 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 TBL1XO60907 577 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 CBX6O95503 412 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 CXCL14O95715 111 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 CRABP2P29373 138 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 APLP1P51693 650 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 NAGLUP54802 743 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 HTRA3P83110 453 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 SEMA5AQ13591 1074 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 DNAL1Q4LDG9 190 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 AARS2Q5JTZ9 985 aaKnown RBP14.23□□□□□ -0.13
SCAF4-202ENST00000399804 SEL1L3Q68CR1 1132 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 STARD13Q9Y3M8 1113 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 KIF3CO14782 793 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 MT-CO1P00395 513 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 PPM1AP35813 382 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 SLC11A1P49279 550 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 CDK18Q07002 472 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 BIRC2Q13490 618 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 MAP7Q14244 749 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 GPRIN1Q7Z2K8 1008 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 TDRPQ86YL5 185 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 SLC41A1Q8IVJ1 513 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 RTL3Q8N8U3 475 aaKnown RBP14.23□□□□□ -0.13
SCAF4-202ENST00000399804 C2orf49Q9BVC5 232 aaPredicted RBP14.23□□□□□ -0.13
SCAF4-202ENST00000399804 CLPBQ9H078 707 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 CAB39LQ9H9S4 337 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 RNF112Q9ULX5 631 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 MAP3K7O43318 606 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 HIST1H2AGP0C0S8 130 aaPredicted RBP14.23□□□□□ -0.13
SCAF4-202ENST00000399804 HIST1H2ADP20671 130 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 HS6ST3Q8IZP7 471 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 TRPV1Q8NER1 839 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 OR10T2Q8NGX3 314 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 HDAC10Q969S8 669 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 CCDC126Q96EE4 140 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 HIST1H2AHQ96KK5 128 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 NDNQ99608 321 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 HIST1H2AJQ99878 128 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 H2AFJQ9BTM1 129 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 SYTL2Q9HCH5 934 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 GRIN2DO15399 1336 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 CLUHO75153 1309 aa14.23□□□□□ -0.13
SCAF4-202ENST00000399804 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 FAM237BA0A1B0GVD1 139 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 TRIM16O95361 564 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 TACR2P21452 398 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 HMOX2P30519 316 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 CORO1AP31146 461 aaKnown RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 MPP5Q8N3R9 675 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 ACMSDQ8TDX5 336 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 DPF3Q92784 378 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 HAPLN3Q96S86 360 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 ZBTB18Q99592 522 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 EFHD1Q9BUP0 239 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 PHACTR1Q9C0D0 580 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 MYLK2Q9H1R3 596 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 SNX15Q9NRS6 342 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 NRXN2Q9P2S2 1712 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 C9IYK1 514 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 ENPP3O14638 875 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 MATN3O15232 486 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 ITGALP20701 1170 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 IVDP26440 423 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 LBRQ14739 615 aaKnown RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 CCDC149Q6ZUS6 474 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 OTOAQ7RTW8 1153 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 KIRREL3Q8IZU9 778 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms