RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RSPH3Q86UC2 560 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 PHC3Q8NDX5 983 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 CDKL2Q92772 493 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 MYCBPQ99417 103 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 VAT1Q99536 393 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 CDH19Q9H159 772 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 DMAP1Q9NPF5 467 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 PRDM5Q9NQX1 630 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 SCN8AQ9UQD0 1980 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 CAPN9O14815 690 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 ATP9BO43861 1147 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 ITGAXP20702 1163 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 PGM1P36871 562 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 CSE1LP55060 971 aaKnown RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 HUNKP57058 714 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 THOC5Q13769 683 aaKnown RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 CLLU1OSQ5K130 101 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 ZNF280DQ6N043 979 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 CCDC117Q8IWD4 279 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 HMGCLL1Q8TB92 370 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 MAN1C1Q9NR34 630 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 SCN5AQ14524 2016 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 ODC1P11926 461 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 TIAL1Q01085 375 aaKnown RBP eCLIP15.64■□□□□ 0.095e-6■■■■□ 21
CPSF7-202ENST00000394888 NRG1Q02297 640 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 ESRP1Q6NXG1 681 aaKnown RBP15.64■□□□□ 0.09
CPSF7-202ENST00000394888 TTC9BQ8N6N2 239 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 STYXQ8WUJ0 223 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 NSMCE3Q96MG7 304 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 SORCS3Q9UPU3 1222 aa15.64■□□□□ 0.09
CPSF7-202ENST00000394888 CCDC78A2IDD5 438 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 GJB3O75712 270 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 UPP2O95045 317 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 SLC10A3P09131 477 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 GRK2P25098 689 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 CCND3P30281 292 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-202ENST00000394888 PLCD3Q8N3E9 789 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 USP33Q8TEY7 942 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 UCMAQ8WVF2 138 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 FCRL2Q96LA5 508 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-202ENST00000394888 WASH4PA8MWX3 477 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 CCNT2O60583 730 aaKnown RBP15.63■□□□□ 0.09
CPSF7-202ENST00000394888 LINGO3P0C6S8 592 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 ARSAP15289 507 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 ZBTB16Q05516 673 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 SLC34A1Q06495 639 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 MPP3Q13368 585 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 SNX30Q5VWJ9 437 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 SCUBE1Q8IWY4 988 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 IL37Q9NZH6 218 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 NUDT5Q9UKK9 219 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 ZNF106Q9H2Y7 1883 aaKnown RBP15.63■□□□□ 0.09
CPSF7-202ENST00000394888 H3BNX3 289 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 MATN2O00339 956 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 MATN3O15232 486 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 B3GAT3O94766 335 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 MPOP05164 745 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 ASGR1P07306 291 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 MPSTP25325 297 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 ZNF135P52742 658 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-202ENST00000394888 TNK2Q07912 1038 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 CACNB2Q08289 660 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-202ENST00000394888 TBCCQ15814 346 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 PKN3Q6P5Z2 889 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 ZYG11AQ6WRX3 759 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 CYHR1Q6ZMK1 362 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 LRRC74BQ6ZQY2 392 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 PGBD5Q8N414 524 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 GLOD4Q9HC38 313 aa15.63■□□□□ 0.09
CPSF7-202ENST00000394888 C20orf96Q9NUD7 363 aaPredicted RBP15.63■□□□□ 0.09
CPSF7-202ENST00000394888 PCSK1P29120 753 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 SPRP35270 261 aaPredicted RBP15.62■□□□□ 0.09
CPSF7-202ENST00000394888 CDH17Q12864 832 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 EPAS1Q99814 870 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 TRMT13Q9NUP7 481 aaKnown RBP15.62■□□□□ 0.09
CPSF7-202ENST00000394888 DPP6P42658 865 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 SLC1A2P43004 574 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 CDK7P50613 346 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 GRIK3Q13003 919 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 TUSC3Q13454 348 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 TBL1YQ9BQ87 522 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 NMRAL1Q9HBL8 299 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 IGSF5Q9NSI5 407 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 MPP6Q9NZW5 540 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 ZDHHC2Q9UIJ5 367 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 MANSC4A6NHS7 340 aaPredicted RBP15.62■□□□□ 0.09
CPSF7-202ENST00000394888 LIN7AO14910 233 aaPredicted RBP15.62■□□□□ 0.09
CPSF7-202ENST00000394888 PHGDHO43175 533 aaKnown RBP15.62■□□□□ 0.09
CPSF7-202ENST00000394888 MTSS1O43312 755 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 SRGAP2BP0DMP2 458 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 RCN2Q14257 317 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 GPNMBQ14956 572 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 TAF11Q15544 211 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 SLC41A1Q8IVJ1 513 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 OR13J1Q8NGT2 312 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 ACTRT2Q8TDY3 377 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 DRC3Q9H069 523 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 ZCWPW1Q9H0M4 648 aa15.62■□□□□ 0.09
CPSF7-202ENST00000394888 RHOJQ9H4E5 214 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms