RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 OPA1O60313 960 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 PCDH8O95206 1070 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 FGFR1OPO95684 399 aaKnown RBP14.1□□□□□ -0.15
CXCL12-202ENST00000374426 PRNPP04156 253 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 MYF5P13349 255 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 PON1P27169 355 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 KRT9P35527 623 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 CLCN6P51797 869 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 PTK2Q05397 1052 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 CCDC15Q0P6D6 951 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 EXOC3L4Q17RC7 722 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 HS1BP3Q53T59 392 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 ARSIQ5FYB1 569 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 BRMS1LQ5PSV4 323 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 C22orf39Q6P5X5 142 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 DPY19L3Q6ZPD9 716 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 GPR155Q7Z3F1 870 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 TFAP2DQ7Z6R9 452 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 SETD3Q86TU7 594 aaPredicted RBP14.1□□□□□ -0.15
CXCL12-202ENST00000374426 SLC47A2Q86VL8 602 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 LSM14AQ8ND56 463 aaKnown RBP14.1□□□□□ -0.15
CXCL12-202ENST00000374426 TNKS2Q9H2K2 1166 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 SYNCQ9H7C4 482 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 SIX2Q9NPC8 291 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 PLCB1Q9NQ66 1216 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 DYRK4Q9NR20 520 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 TMPRSS4Q9NRS4 437 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 RRN3Q9NYV6 651 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 MPP6Q9NZW5 540 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 U3KQA8 63 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 TRPM6Q9BX84 2022 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 PIEZO2Q9H5I5 2752 aa14.1□□□□□ -0.15
CXCL12-202ENST00000374426 IGLV3-10A0A075B6K4 115 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 TEX51A0A1B0GUA7 166 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 GTPBP10A4D1E9 387 aaKnown RBP14.09□□□□□ -0.15
CXCL12-202ENST00000374426 FOXN3O00409 490 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-202ENST00000374426 GADD45BO75293 160 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-202ENST00000374426 ZNF821O75541 412 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-202ENST00000374426 LEFTY1O75610 366 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 MPOP05164 745 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 PNMA6AP0CW24 399 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-202ENST00000374426 CLCN1P35523 988 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 SULT1E1P49888 294 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 SNX16P57768 344 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 RNASE9P60153 205 aaKnown RBP14.09□□□□□ -0.15
CXCL12-202ENST00000374426 FGL2Q14314 439 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 ZNF542PQ5EBM4 170 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 PCSK4Q6UW60 755 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 Q6ZSR6 202 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 IRF2BP1Q8IU81 584 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 CREBRFQ8IUR6 639 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 OR7D4Q8NG98 312 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 PGAP3Q96FM1 320 aaPredicted RBP14.09□□□□□ -0.15
CXCL12-202ENST00000374426 IFT43Q96FT9 208 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 HIC2Q96JB3 615 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 BMFQ96LC9 184 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 APOLD1Q96LR9 279 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 GPR27Q9NS67 375 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.09□□□□□ -0.15
CXCL12-202ENST00000374426 NLGN3Q9NZ94 848 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 ZNF212Q9UDV6 495 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 IL36AQ9UHA7 158 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 RWDD2AQ9UIY3 292 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 WASF2Q9Y6W5 498 aa14.09□□□□□ -0.15
CXCL12-202ENST00000374426 COL6A6A6NMZ7 2263 aa14.08□□□□□ -0.15
CXCL12-202ENST00000374426 POM121BA6NF01 834 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 A6NNZ2 444 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 K7ESM1 405 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 SCAMP1O15126 338 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 ZMPSTE24O75844 475 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 NEBLO76041 1014 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 ENDOD1O94919 500 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 GP1BAP07359 652 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 ALPPL2P10696 532 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 OR1E1P30953 314 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 CXADRP78310 365 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 DEUP1Q05D60 604 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 FZD2Q14332 565 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 SMYD5Q6GMV2 418 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 LRRC31Q6UY01 552 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 PTAR1Q7Z6K3 402 aaPredicted RBP14.08□□□□□ -0.16
CXCL12-202ENST00000374426 ZDHHC17Q8IUH5 632 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 ZNF843Q8N446 348 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 FAM181AQ8N9Y4 354 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 ZNF248Q8NDW4 579 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 NAF1Q96HR8 494 aaKnown RBP14.08□□□□□ -0.16
CXCL12-202ENST00000374426 C1orf74Q96LT6 269 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 ZNF578Q96N58 590 aaPredicted RBP14.08□□□□□ -0.16
CXCL12-202ENST00000374426 TBCBQ99426 244 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 LGMNQ99538 433 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 SLC17A9Q9BYT1 436 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 DNAJC28Q9NX36 388 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 DNAJC12Q9UKB3 198 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 STAP1Q9ULZ2 295 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 HS3ST3A1Q9Y663 406 aa14.08□□□□□ -0.16
CXCL12-202ENST00000374426 ILVBLA1L0T0 632 aa14.07□□□□□ -0.16
CXCL12-202ENST00000374426 NEMP2A6NFY4 417 aa14.07□□□□□ -0.16
CXCL12-202ENST00000374426 RAD51BO15315 384 aa14.07□□□□□ -0.16
CXCL12-202ENST00000374426 USP12O75317 370 aa14.07□□□□□ -0.16
CXCL12-202ENST00000374426 DXOO77932 396 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms