RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
IFFO1-201ENST00000336604 SREK1Q8WXA9 508 aaKnown RBP18.1■□□□□ 0.49
IFFO1-201ENST00000336604 SENP8Q96LD8 212 aa18.1■□□□□ 0.49
IFFO1-201ENST00000336604 TEKT5Q96M29 485 aa18.1■□□□□ 0.49
IFFO1-201ENST00000336604 NUF2Q9BZD4 464 aa18.1■□□□□ 0.49
IFFO1-201ENST00000336604 UNKQ9C0B0 810 aaKnown RBP18.1■□□□□ 0.49
IFFO1-201ENST00000336604 KLHL4Q9C0H6 718 aa18.1■□□□□ 0.49
IFFO1-201ENST00000336604 WDCPQ9H6R7 721 aa18.1■□□□□ 0.49
IFFO1-201ENST00000336604 TRHDEQ9UKU6 1024 aa18.1■□□□□ 0.49
IFFO1-201ENST00000336604 MRPL42Q9Y6G3 142 aaKnown RBP18.1■□□□□ 0.49
IFFO1-201ENST00000336604 H3BNX3 289 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 CSE1LP55060 971 aaKnown RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 DLG1Q12959 904 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 ZNF460Q14592 562 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 USP10Q14694 798 aaKnown RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 MFSD10Q14728 455 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 LSM12Q3MHD2 195 aaKnown RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 METTL21CQ5VZV1 264 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 ITPRIPL1Q6GPH6 555 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 KBTBD6Q86V97 674 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 SNX32Q86XE0 403 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 ST13P4Q8IZP2 240 aaPredicted RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 SPATA6LQ8N4H0 392 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 CNTD1Q8N815 330 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 ZSCAN18Q8TBC5 510 aaPredicted RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 NMD3Q96D46 503 aaKnown RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 RTKNQ9BST9 563 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 C1QTNF1Q9BXJ1 281 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 ZNF408Q9H9D4 720 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 TLK1Q9UKI8 766 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 SH3BP1Q9Y3L3 701 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 SHROOM3Q8TF72 1996 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 MAGEB16A2A368 324 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 FBXO21O94952 628 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 JUNP05412 331 aaKnown RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 GABRB3P28472 473 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 HCAR3P49019 387 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 NPY2RP49146 381 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 ADAM17P78536 824 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 FRG1Q14331 258 aaKnown RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 ANO4Q32M45 955 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 ARL13BQ3SXY8 428 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 TMEM198Q66K66 360 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 KCTD4Q8WVF5 259 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 PPP1R10Q96QC0 940 aaKnown RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 GPR22Q99680 433 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 TSPYL2Q9H2G4 693 aaPredicted RBP18.09■□□□□ 0.49
IFFO1-201ENST00000336604 CNGB3Q9NQW8 809 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 RAD54BQ9Y620 910 aa18.09■□□□□ 0.49
IFFO1-201ENST00000336604 HDAC3O15379 428 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 OR6B1O95007 311 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 PIGNO95427 931 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 PIK3R1P27986 724 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 PRDX6P30041 224 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 LRPAP1P30533 357 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 MSX2P35548 267 aaPredicted RBP18.08■□□□□ 0.49
IFFO1-201ENST00000336604 NUMBP49757 651 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 RPL14P50914 215 aaKnown RBP18.08■□□□□ 0.49
IFFO1-201ENST00000336604 CDH17Q12864 832 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 SEL1L3Q68CR1 1132 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 ARHGAP36Q6ZRI8 547 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 ACAD11Q709F0 780 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 TRIM74Q86UV6 250 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 TRIM73Q86UV7 250 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 ZNF419Q96HQ0 510 aaPredicted RBP18.08■□□□□ 0.49
IFFO1-201ENST00000336604 MS4A4AQ96JQ5 239 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 ZDHHC7Q9NXF8 308 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 ZDHHC2Q9UIJ5 367 aa18.08■□□□□ 0.49
IFFO1-201ENST00000336604 CCL15-CCL14A0A0B4J2E2 113 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 MTSS1O43312 755 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 MT-CYBP00156 380 aaPredicted RBP18.08■□□□□ 0.48
IFFO1-201ENST00000336604 AHSGP02765 367 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 SLC35E2BP0CK96 405 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 SRGAP2BP0DMP2 458 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 TFEBP19484 476 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 CCL15Q16663 113 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 LIPMQ5VYY2 423 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 SCYL1Q96KG9 808 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 DRC3Q9H069 523 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 GALNT8Q9NY28 637 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 CLIC5Q9NZA1 410 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 ATXN10Q9UBB4 475 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 RAP2CQ9Y3L5 183 aa18.08■□□□□ 0.48
IFFO1-201ENST00000336604 C9IYK1 514 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 GJA9P57773 515 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 MED21Q13503 144 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 POU6F1Q14863 301 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 ZYG11AQ6WRX3 759 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 BHLHA9Q7RTU4 235 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 SATL1Q86VE3 508 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 SLC41A1Q8IVJ1 513 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 DENND6AQ8IWF6 608 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 CENPLQ8N0S6 344 aaPredicted RBP18.07■□□□□ 0.48
IFFO1-201ENST00000336604 FSTL5Q8N475 847 aaPredicted RBP18.07■□□□□ 0.48
IFFO1-201ENST00000336604 C3orf58Q8NDZ4 430 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 DPF3Q92784 378 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 MARK4Q96L34 752 aa18.07■□□□□ 0.48
IFFO1-201ENST00000336604 CHCHD3Q9NX63 227 aaKnown RBP18.07■□□□□ 0.48
IFFO1-201ENST00000336604 RUVBL2Q9Y230 463 aaKnown RBP18.07■□□□□ 0.48
IFFO1-201ENST00000336604 GRIA2P42262 883 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms