RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 ARL2P36404 184 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 SQLEQ14534 574 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 C11orf96Q7Z7L8 435 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 ACTRT2Q8TDY3 377 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 VIRMAQ69YN4 1812 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 PMM2O15305 246 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 KRT36O76013 467 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 EPB42P16452 691 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 VCLP18206 1134 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 CD86P42081 329 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 MRPS6P82932 125 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 STXBP5Q5T5C0 1151 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 SLC41A1Q8IVJ1 513 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 BHLHE22Q8NFJ8 381 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZSCAN18Q8TBC5 510 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 RSPH1Q8WYR4 309 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 C2orf49Q9BVC5 232 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 SPTLC1O15269 473 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 SMNDC1O75940 238 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 INSCQ1MX18 579 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 CXCL17Q6UXB2 119 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 XYLT1Q86Y38 959 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 PGBD3Q8N328 593 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 PTGR2Q8N8N7 351 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 TLCD1Q96CP7 247 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 FAM126AQ9BYI3 521 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 MIEF1Q9NQG6 463 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 FBXO6Q9NRD1 293 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 SLC17A7Q9P2U7 560 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 ADRA1BP35368 520 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 SOX6P35712 828 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 GSTA3Q16772 222 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 BRMS1LQ5PSV4 323 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 AAGABQ6PD74 315 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 DHDDSQ86SQ9 333 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 ITFG1Q8TB96 612 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 TMCO1Q9UM00 188 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 PRPF19Q9UMS4 504 aaKnown RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZNF839A8K0R7 811 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 RGS5O15539 181 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 S100A3P33764 101 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 TTKP33981 857 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 PSME3P61289 254 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 PPIDQ08752 370 aaKnown RBP17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 EPS8Q12929 822 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 TMEM26Q6ZUK4 368 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 CLNKQ7Z7G1 428 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 CPT1BQ92523 772 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 RHOJQ9H4E5 214 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 SH3BP4Q9P0V3 963 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 XPR1Q9UBH6 696 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 LGALS13Q9UHV8 139 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 M0R2N6 131 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 BCL10O95999 233 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 DGKAP23743 735 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 POU1F1P28069 291 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 ICAM3P32942 547 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 POLR2LP62875 67 aaKnown RBP17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 ACBD5Q5T8D3 534 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 FAM35AQ86V20 835 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 OOSP2Q86WS3 158 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 KCTD4Q8WVF5 259 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 STARD8Q92502 1023 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 CSPG4P5Q96PW8 444 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 TRMOQ9BU70 441 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 SIX2Q9NPC8 291 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 DPP7Q9UHL4 492 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 ENOPH1Q9UHY7 261 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 ANAPC2Q9UJX6 822 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 PLLPQ9Y342 182 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 SPACA6W5XKT8 324 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 WFS1O76024 890 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 ATP6V1C1P21283 382 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 DNAJC14Q6Y2X3 702 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 SH3BP5LQ7L8J4 393 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 PLD5Q8N7P1 536 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 PPTC7Q8NI37 304 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 PRRG3Q9BZD7 231 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 KRT84Q9NSB2 600 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 BTBD7Q9P203 1132 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZNF112Q9UJU3 913 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 FMN2Q9NZ56 1722 aa17.29■□□□□ 0.36
TRAPPC11-201ENST00000334690 DLG5Q8TDM6 1919 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 BCLAF3A2AJT9 711 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 RECQL5O94762 991 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 MLYCDO95822 493 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 DGKZQ13574 1117 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 BOP1Q14137 746 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 PABPC1LQ4VXU2 614 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 GJC2Q5T442 439 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 DRICH1Q6PGQ1 229 aaPredicted RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 IL27RAQ6UWB1 636 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 TMEM132CQ8N3T6 1108 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SLC7A5P2Q9GIP4 190 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZC4H2Q9NQZ6 224 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 SYBUQ9NX95 663 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 GIT1Q9Y2X7 761 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 RNASEH1O60930 286 aaKnown RBP17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 PCNAP12004 261 aa17.28■□□□□ 0.36
TRAPPC11-201ENST00000334690 TTPAP49638 278 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms