RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 FNIP1Q8TF40 1166 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 MRPS31Q92665 395 aaKnown RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 DUSP16Q9BY84 665 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 TMEM59LQ9UK28 342 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PEX11AO75192 247 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 TCF4P15884 667 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 CCT8P50990 548 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PDK3Q15120 406 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PRMT9Q6P2P2 845 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 PCSK9Q8NBP7 692 aaKnown RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 KCTD15Q96SI1 283 aaPredicted RBP17.45■□□□□ 0.38
GABRB3-202ENST00000311550 CATSPERZQ9NTU4 200 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 FAM53CQ9NYF3 392 aa17.45■□□□□ 0.38
GABRB3-202ENST00000311550 JAG1P78504 1218 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 SLC25A52Q3SY17 297 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 RINLQ6ZS11 566 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 EME2A4GXA9 379 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-202ENST00000311550 ZNF135P52742 658 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-202ENST00000311550 CHN2P52757 468 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 ATG16L2Q8NAA4 619 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 BDH2Q9BUT1 245 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 DENND2DQ9H6A0 471 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-202ENST00000311550 ATP11BQ9Y2G3 1177 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 GNG14A0A1W2PPG7 69 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 TMEM114B3SHH9 223 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 FGF10O15520 208 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-202ENST00000311550 SEC22BO75396 215 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 RIPK1Q13546 671 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 LIPMQ5VYY2 423 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 PYROXD2Q8N2H3 581 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 UBA2Q9UBT2 640 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-202ENST00000311550 SLIT2O94813 1529 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 KPNA6O60684 536 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 NRLP54845 237 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 SH3PXD2AQ5TCZ1 1133 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 SCIMPQ6UWF3 145 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 ZFRQ96KR1 1074 aaKnown RBP17.44■□□□□ 0.38
GABRB3-202ENST00000311550 TBCDQ9BTW9 1192 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 CDH9Q9ULB4 789 aa17.44■□□□□ 0.38
GABRB3-202ENST00000311550 DDX5P17844 614 aaKnown RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 PIK3R1P27986 724 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 KPNA1P52294 538 aaPredicted RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 PPIDQ08752 370 aaKnown RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 VWA5B1Q5TIE3 1220 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 IL27RAQ6UWB1 636 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 MILR1Q7Z6M3 343 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 OR52K2Q8NGK3 314 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 OSCP1Q8WVF1 389 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 CASP10Q92851 521 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 SERAC1Q96JX3 654 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 CDH19Q9H159 772 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 MPP6Q9NZW5 540 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 SFMBT1Q9UHJ3 866 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 FBXO5Q9UKT4 447 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 C2P06681 752 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 POU1F1P28069 291 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 WEE1P30291 646 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 GSTT1P30711 240 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 GSSP48637 474 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 HIST2H2ACQ16777 129 aaPredicted RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 HIST2H2AA3Q6FI13 130 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 FAM35AQ86V20 835 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 DLG3Q92796 817 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 SH3GL1Q99961 368 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 CHKBQ9Y259 395 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 BTRCQ9Y297 605 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 TBKBP1A7MCY6 615 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 F8W810 466 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 MPSTP25325 297 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 CRHR1P34998 444 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 ATN1P54259 1190 aaPredicted RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 LPCAT4Q643R3 524 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 SLC4A5Q9BY07 1137 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 PDZD7Q9H5P4 517 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 RAD51BO15315 384 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 SNRPB2P08579 225 aaKnown RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 PCNAP12004 261 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 MAPK1P28482 360 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 DEPDC1Q5TB30 811 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 FBXW8Q8N3Y1 598 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 ROGDIQ9GZN7 287 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 CLIC5Q9NZA1 410 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 WFS1O76024 890 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 STAU1O95793 577 aaKnown RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 RUNX1T1Q06455 604 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 LBX2Q6XYB7 198 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 ANKS3Q6ZW76 656 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 DEFB128Q7Z7B8 93 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 VPS33AQ96AX1 596 aa17.43■□□□□ 0.38
GABRB3-202ENST00000311550 NTPCRQ9BSD7 190 aaKnown RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 PAIP2BQ9ULR5 123 aaKnown RBP17.43■□□□□ 0.38
GABRB3-202ENST00000311550 ABCC6O95255 1503 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 TMED10P49755 219 aaKnown RBP17.42■□□□□ 0.38
GABRB3-202ENST00000311550 TXNRD3NBQ6F5E7 133 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 GPSM1Q86YR5 675 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 FAM192AQ9GZU8 254 aa17.42■□□□□ 0.38
GABRB3-202ENST00000311550 MGAT4DA6NG13 374 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms