RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SMAD3P84022 425 aaKnown RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 KRT17Q04695 432 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 ITIH4Q14624 930 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 GEN1Q17RS7 908 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 DGLUCYQ7Z3D6 616 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 TOP6BLQ8N6T0 577 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 BCL7CQ8WUZ0 217 aaPredicted RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 SNF8Q96H20 258 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 SERPINB12Q96P63 405 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 TGS1Q96RS0 853 aaKnown RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 NKX2-4Q9H2Z4 354 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CCDC134Q9H6E4 229 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CYP3A43Q9HB55 503 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 ANAPC7Q9UJX3 599 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 DSEQ9UL01 958 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 DOLKQ9UPQ8 538 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 POLHQ9Y253 713 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 M0QZQ0 153 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 SYN3O14994 580 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 FGF18O76093 207 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 RCN1Q15293 331 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 HHATQ5VTY9 493 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 FAM171A1Q5VUB5 890 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 TRIM72Q6ZMU5 477 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 METTL23Q86XA0 190 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 ADGRF2Q8IZF7 708 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 TMEM86AQ8N2M4 240 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 TTC39CQ8N584 583 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CCDC33Q8N5R6 958 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 ZBTB44Q8NCP5 570 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 MDM1Q8TC05 714 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 DDX1Q92499 740 aaKnown RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 VPS39Q96JC1 886 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 RIPOR3Q96MK2 946 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 PLEKHG4BQ96PX9 1271 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CCDC77Q9BR77 488 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 C17orf80Q9BSJ5 609 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 BCO2Q9BYV7 579 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 SMYD3Q9H7B4 428 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 SLC28A3Q9HAS3 691 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 MRPL47Q9HD33 250 aaKnown RBP11.86□□□□□ -0.51
LINC00538-201ENST00000626109 ASIC3Q9UHC3 531 aa11.86□□□□□ -0.51
LINC00538-201ENST00000626109 CEP290O15078 2479 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 KIAA1671Q9BY89 1806 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 SLC12A8A0AV02 714 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 SGK1O00141 431 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 PRKD3O94806 890 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 ARHGEF15O94989 841 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 RB1P06400 928 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 TYMPP19971 482 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 NSFP46459 744 aaKnown RBP11.85□□□□□ -0.51
LINC00538-201ENST00000626109 TAP1Q03518 808 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 PTP4A2Q12974 167 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 SIX1Q15475 284 aaPredicted RBP11.85□□□□□ -0.51
LINC00538-201ENST00000626109 SOWAHAQ2M3V2 549 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 ANKRD20A8PQ5CZ79 823 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 COX20Q5RI15 118 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 XKR5Q6UX68 686 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 MCOLN2Q8IZK6 566 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 OR2C3Q8N628 320 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 TTC13Q8NBP0 860 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 VCPIP1Q96JH7 1222 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 BTBD6Q96KE9 485 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 EXOC2Q96KP1 924 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 TMEM74Q96NL1 305 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
LINC00538-201ENST00000626109 TAAR9Q96RI9 348 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 C11orf84Q9BUA3 381 aaPredicted RBP11.85□□□□□ -0.51
LINC00538-201ENST00000626109 RSRP1Q9BUV0 290 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 GPR62Q9BZJ7 368 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 FAM124BQ9H5Z6 455 aaPredicted RBP11.85□□□□□ -0.51
LINC00538-201ENST00000626109 KLC4Q9NSK0 619 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 INTS10Q9NVR2 710 aaKnown RBP11.85□□□□□ -0.51
LINC00538-201ENST00000626109 HAUS2Q9NVX0 235 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 FKBPLQ9UIM3 349 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 ITGB1BP2Q9UKP3 347 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 COLQQ9Y215 455 aaPredicted RBP11.85□□□□□ -0.51
LINC00538-201ENST00000626109 PDE4DIPQ5VU43 2346 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 SCN1AP35498 2009 aa11.85□□□□□ -0.51
LINC00538-201ENST00000626109 SMIM23A6NLE4 172 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 C5orf67F2Z3F1 127 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 MAP3K13O43283 966 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 AP1G1O43747 822 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 PAPLNO95428 1278 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 SOD2P04179 222 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 WEE2P0C1S8 567 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 UNGP13051 313 aaPredicted RBP11.84□□□□□ -0.51
LINC00538-201ENST00000626109 CD58P19256 250 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 RAP1GAPP47736 663 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 GIPRP48546 466 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 CDH8P55286 799 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 YBEYP58557 167 aaPredicted RBP11.84□□□□□ -0.51
LINC00538-201ENST00000626109 ERVK-21P61565 698 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 C17orf67Q0P5P2 114 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 PTK6Q13882 451 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 USP41Q3LFD5 358 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 BOLA3Q53S33 107 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 TNFAIP8L3Q5GJ75 292 aa11.84□□□□□ -0.51
LINC00538-201ENST00000626109 RPS26P11Q5JNZ5 115 aaPredicted RBP11.84□□□□□ -0.51
LINC00538-201ENST00000626109 WSCD1Q658N2 575 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms