RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 DCDC5Q6ZRR9 648 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 SLC46A3Q7Z3Q1 461 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 ZNF804AQ7Z570 1209 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 NEK8Q86SG6 692 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 PEG10Q86TG7 708 aaKnown RBP5.44□□□□□ -1.54
LINC00397-202ENST00000606785 ADGRF2Q8IZF7 708 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 GHDCQ8N2G8 530 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 TERB1Q8NA31 727 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 CADM4Q8NFZ8 388 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 PROKR1Q8TCW9 393 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 POMGNT1Q8WZA1 660 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 NELL1Q92832 810 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 SMARCE1Q969G3 411 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 HIC2Q96JB3 615 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 ZMAT2Q96NC0 199 aaKnown RBP5.44□□□□□ -1.54
LINC00397-202ENST00000606785 BAG1Q99933 345 aaPredicted RBP5.44□□□□□ -1.54
LINC00397-202ENST00000606785 MAK16Q9BXY0 300 aaKnown RBP5.44□□□□□ -1.54
LINC00397-202ENST00000606785 KAT14Q9H8E8 782 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 C20orf141Q9NUB4 165 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 ARL15Q9NXU5 204 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 ASIC5Q9NY37 505 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 DTX4Q9Y2E6 619 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 HEMK1Q9Y5R4 338 aaPredicted RBP5.44□□□□□ -1.54
LINC00397-202ENST00000606785 SPATA31A5Q5VU36 1347 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 SPATA31A6Q5VVP1 1343 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 SPATA31A7Q8IWB4 1347 aa5.44□□□□□ -1.54
LINC00397-202ENST00000606785 PABPN1LA6NDY0 278 aaKnown RBP5.43□□□□□ -1.54
LINC00397-202ENST00000606785 HNRNPCL1O60812 293 aaKnown RBP5.43□□□□□ -1.54
LINC00397-202ENST00000606785 HLA-DQA2P01906 255 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 RPN1P04843 607 aaKnown RBP5.43□□□□□ -1.54
LINC00397-202ENST00000606785 TTKP33981 857 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 PRAMEP78395 509 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 AIMP2Q13155 320 aaKnown RBP5.43□□□□□ -1.54
LINC00397-202ENST00000606785 FBXO43Q4G163 708 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 LY6G5CQ5SRR4 150 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 TMEM154Q6P9G4 183 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 SARM1Q6SZW1 724 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 TADA2BQ86TJ2 420 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 PALM2Q8IXS6 379 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 SLC44A3Q8N4M1 653 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 SCAIQ8N9R8 606 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 NEK9Q8TD19 979 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 JAKMIP2Q96AA8 810 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 RADILQ96JH8 1075 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 ADAD1Q96M93 576 aaKnown RBP5.43□□□□□ -1.54
LINC00397-202ENST00000606785 CMTM3Q96MX0 182 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 MAP7D2Q96T17 732 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 BDH2Q9BUT1 245 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 STRA6Q9BX79 667 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 HEMGNQ9BXL5 484 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 SCPEP1Q9HB40 452 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 Q9N2J8 555 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 TXNRD2Q9NNW7 524 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 CHORDC1Q9UHD1 332 aaPredicted RBP5.43□□□□□ -1.54
LINC00397-202ENST00000606785 ADAM18Q9Y3Q7 739 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 CAPN7Q9Y6W3 813 aa5.43□□□□□ -1.54
LINC00397-202ENST00000606785 FRMD3A2A2Y4 597 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 OR6C68A6NDL8 312 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 TMEM247A6NEH6 219 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 EXOC3O60645 756 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 ADAP00813 363 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CLTBP09497 229 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 GCH1P30793 250 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 EIF2DP41214 584 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 PTPN9P43378 593 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CCT8P50990 548 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 BLKP51451 505 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 TERF1P54274 439 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 MRPS35P82673 323 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CYP4A11Q02928 519 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CDC16Q13042 620 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 PUM1Q14671 1186 aaKnown RBP eCLIP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 LARS2Q15031 903 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 RASA2Q15283 850 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 DPCR1Q3MIW9 517 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 ANXA2RQ3ZCQ2 193 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 C1QTNF12Q5T7M4 302 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 ATG9BQ674R7 924 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 GPR139Q6DWJ6 353 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 NAA16Q6N069 864 aaPredicted RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 RPUSD3Q6P087 351 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 TMEM65Q6PI78 240 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 VSTM1Q6UX27 236 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 ARHGAP12Q8IWW6 846 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 LCORLQ8N3X6 602 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 DNAAF1Q8NEP3 725 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CACTINQ8WUQ7 758 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CELF1Q92879 486 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 TTC14Q96N46 770 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 PLEKHG4BQ96PX9 1271 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CDK5RAP1Q96SZ6 601 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 MLST8Q9BVC4 326 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 SH2D4AQ9H788 454 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 ZCCHC17Q9NP64 241 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 ENTPD7Q9NQZ7 604 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 SNTG1Q9NSN8 517 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 NCKIPSDQ9NZQ3 722 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 KIAA1456Q9P272 454 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CNOT11Q9UKZ1 510 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms