RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 DSG4Q86SJ6 1040 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 PRPF39Q86UA1 669 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 IQCHQ86VS3 1027 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3Q8IZP1 549 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 ALG14Q96F25 216 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 LRIG1Q96JA1 1093 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TMEM51Q9NW97 253 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 DMTF1Q9Y222 760 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 CELSR3Q9NYQ7 3312 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 CABIN1Q9Y6J0 2220 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 CBX4O00257 560 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 CBFA2T2O43439 604 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 PLRG1O43660 514 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 ATP9BO43861 1147 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 CYP1A1P04798 512 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 SCNN1AP37088 669 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 METAP1P53582 386 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 DNAJC3Q13217 504 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 ILKQ13418 452 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 FIGNQ5HY92 759 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 FBXL22Q6P050 247 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 FAM183BPQ6ZVS7 135 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 SLC26A9Q7LBE3 791 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 KANSL1Q7Z3B3 1105 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 TRIM69Q86WT6 500 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 CIR1Q86X95 450 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 SPATS2Q86XZ4 545 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 EID2Q8N6I1 236 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 ZNF397Q8NF99 534 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 SLC20A1Q8WUM9 679 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 OR8D1Q8WZ84 308 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 NXPE2Q96DL1 559 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 FAM204AQ9H8W3 233 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 DDIT4Q9NX09 232 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 RRN3Q9NYV6 651 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 PPM1HQ9ULR3 514 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 NBEAQ8NFP9 2946 aa18.01■□□□□ 0.47
SHKBP1-203ENST00000594298 PLK4O00444 970 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 ALOX15BO15296 676 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 MAGEC1O60732 1142 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 JUPP14923 745 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 CHRNB2P17787 502 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 NOMO3P69849 1222 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 FMO1Q01740 532 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 AUHQ13825 339 aaKnown RBP18■□□□□ 0.47
SHKBP1-203ENST00000594298 C6orf118Q5T5N4 469 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 NAA35Q5VZE5 725 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 OLFML1Q6UWY5 402 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 DEFB106AQ8N104 65 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 CPA5Q8WXQ8 436 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 RPRD1AQ96P16 312 aaPredicted RBP18■□□□□ 0.47
SHKBP1-203ENST00000594298 AGPAT1Q99943 283 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 FEM1AQ9BSK4 669 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 SARDHQ9UL12 918 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 OR51B4Q9Y5P0 310 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 APC2O95996 2303 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 KNL1Q8NG31 2342 aa18■□□□□ 0.47
SHKBP1-203ENST00000594298 C1QTNF3-AMACRE9PGA6 284 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 MCF2LO15068 1137 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 RTN2O75298 545 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 DAB1O75553 588 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 NOS2P35228 1153 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 NSFP46459 744 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 BNIP3Q12983 259 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 C5orf22Q49AR2 442 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 AGBL4Q5VU57 503 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 PPP1R2P3Q6NXS1 205 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 FBXL19Q6PCT2 694 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 CACTIN-AS1Q8N1I8 211 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 OR52K2Q8NGK3 314 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 BAP1Q92560 729 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 RNF34Q969K3 372 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 NRSN2Q9GZP1 204 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 SEPT11Q9NVA2 429 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 IFNKQ9P0W0 207 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 SLC25A13Q9UJS0 675 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 STAP1Q9ULZ2 295 aa17.99■□□□□ 0.47
SHKBP1-203ENST00000594298 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 LRRC53A6NM62 1247 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 GRAP2O75791 330 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 CKMT2P17540 419 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 TNFAIP3P21580 790 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 NUMBP49757 651 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 CENPCQ03188 943 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 ZNF177Q13360 481 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 RTP5Q14D33 572 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 DLG2Q15700 870 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 ASIC2Q16515 512 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 ACCSLQ4AC99 568 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 FAM102AQ5T9C2 384 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 HES3Q5TGS1 186 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 IRF2BP2Q7Z5L9 587 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 XYLT1Q86Y38 959 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 BBC3Q96PG8 261 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 PREBQ9HCU5 417 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 AIPL1Q9NZN9 384 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 TBC1D30Q9Y2I9 924 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 HS3ST4Q9Y661 456 aa17.98■□□□□ 0.47
SHKBP1-203ENST00000594298 LOC400499M0QZD8 3231 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 191.5 ms