RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SAE1Q9UBE0 346 aaPredicted RBP5.9□□□□□ -1.46
SDF2-206ENST00000587788 CTNNAL1Q9UBT7 734 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 PPM1HQ9ULR3 514 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 SLC6A14Q9UN76 642 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 MTCH2Q9Y6C9 303 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 TEX264Q9Y6I9 313 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 USH1CQ9Y6N9 552 aa5.9□□□□□ -1.46
SDF2-206ENST00000587788 UNC80Q8N2C7 3258 aa5.9□□□□□ -1.47
SDF2-206ENST00000587788 TSC2P49815 1807 aa5.9□□□□□ -1.47
SDF2-206ENST00000587788 MTCL1Q9Y4B5 1905 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 TMEM238LA0A1B0GVL6 79 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 TBKBP1A7MCY6 615 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 GOLGA8MH3BSY2 632 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 H7C4K7 107 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 AP3B1O00203 1094 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 NRP1O14786 923 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 KLF11O14901 512 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CHUKO15111 745 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 GRM6O15303 877 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 OPHN1O60890 802 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 DDHD2O94830 711 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 TMEM63AO94886 807 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CSPG5O95196 566 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 TGDSO95455 350 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 F9P00740 461 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 ATP5BP06576 529 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 GALTP07902 379 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 SNRPAP09012 282 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 PDGFRBP09619 1106 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 TROVE2P10155 538 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDF2-206ENST00000587788 KRT4P19013 534 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 PRKCHP24723 683 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 DNAJB1P25685 340 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 LMO2P25791 158 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 ADH6P28332 368 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 SSTR1P30872 391 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 HNRNPH1P31943 449 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 SLC8A1P32418 973 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CTNNB1P35222 781 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 RPA3P35244 121 aaPredicted RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 ELK3P41970 407 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 MAGEA3P43357 314 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 OR1G1P47890 313 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 PCBP4P57723 403 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 YWHAGP61981 247 aaKnown RBP eCLIP5.89□□□□□ -1.47
SDF2-206ENST00000587788 YWHAZP63104 245 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 TSPY1Q01534 308 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 YWHAHQ04917 246 aaPredicted RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 SLC18A2Q05940 514 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CDK18Q07002 472 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 BNIP1Q12981 228 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 SEMA5AQ13591 1074 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CAMK1Q14012 370 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 FASTKD3Q14CZ7 662 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 PDK1Q15118 436 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 TAF5Q15542 800 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 NFE2Q16621 373 aaPredicted RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 CDO1Q16878 200 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 KCTD19Q17RG1 926 aaPredicted RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 ARL13BQ3SXY8 428 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 RNFT1Q5M7Z0 435 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 STXBP5Q5T5C0 1151 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 ANKRD22Q5VYY1 191 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 WSCD1Q658N2 575 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 HEATR6Q6AI08 1181 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 TRNP1Q6NT89 227 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 FAM171BQ6P995 826 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 C1orf228Q6PIY5 440 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CCDC91Q7Z6B0 441 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 ZC3H18Q86VM9 953 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 LRRC6Q86X45 466 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CHSY1Q86X52 802 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CMTR2Q8IYT2 770 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 SIX6OS1Q8N1H7 587 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 SCML4Q8N228 414 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 BANPQ8N9N5 519 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CCDC63Q8NA47 563 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 B3GALNT2Q8NCR0 500 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 GDAP1Q8TB36 358 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 RAB3IL1Q8TBN0 382 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 SLC2A14Q8TDB8 520 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 TFB1MQ8WVM0 346 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 KBTBD7Q8WVZ9 684 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 RNF34Q969K3 372 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 NT5C3BQ969T7 300 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 NXPE3Q969Y0 559 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 NTAN1Q96AB6 310 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CEP295NLQ96MC4 621 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 CSPG4P5Q96PW8 444 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 SLC2A13Q96QE2 648 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 RAB3IPQ96QF0 476 aaPredicted RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 PAIP2Q9BPZ3 127 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 TACO1Q9BSH4 297 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 IQCGQ9H095 443 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 CXCL16Q9H2A7 254 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 DHX35Q9H5Z1 703 aaKnown RBP5.89□□□□□ -1.47
SDF2-206ENST00000587788 CWH43Q9H720 699 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 LRRC4Q9HBW1 653 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 SLC40A1Q9NP59 571 aa5.89□□□□□ -1.47
SDF2-206ENST00000587788 FAM49BQ9NUQ9 324 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms