RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ACCSLQ4AC99 568 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 ZFYVE27Q5T4F4 411 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 TMCO3Q6UWJ1 677 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 LEKR1Q6ZMV7 388 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 ZNF662Q6ZS27 426 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 PGBD3Q8N328 593 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 RNF10Q8N5U6 811 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 LZTR1Q8N653 840 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 PQLC3Q8N755 202 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 RNF25Q96BH1 459 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 RNF157Q96PX1 679 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 FAM129BQ96TA1 746 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 TPSD1Q9BZJ3 242 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 PRDM16Q9HAZ2 1276 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 FAM86C1Q9NVL1 165 aa12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 DDX56Q9NY93 547 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 BCCIPQ9P287 314 aaKnown RBP eCLIP12.2□□□□□ -0.46
RABGGTA-218ENST00000560777 ARHGAP42A6NI28 874 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 ZNF487B1APH4 448 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 J3KR12 359 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 ZBTB24O43167 697 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 PSTPIP1O43586 416 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 PALMO75781 387 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 CCDC175P0C221 793 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 MARCKSL1P49006 195 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 SERPINH1P50454 418 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 CLCN6P51797 869 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 SRSF5Q13243 272 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 IFI16Q16666 785 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 NCBP2-AS2Q69YL0 99 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 ARHGAP36Q6ZRI8 547 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 NT5DC3Q86UY8 548 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 VSIG1Q86XK7 387 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 ZNF354CQ86Y25 554 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 STK40Q8N2I9 435 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 FRMD1Q8N878 549 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 RLN3Q8WXF3 142 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 KRT35Q92764 455 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 TSGA10Q9BZW7 698 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 RSPH9Q9H1X1 276 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 KCNF1Q9H3M0 494 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 PDFQ9HBH1 243 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 GUCA1BQ9UMX6 200 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 INVSQ9Y283 1065 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 FCF1Q9Y324 198 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 PCDHA3Q9Y5H8 950 aa12.19□□□□□ -0.46
RABGGTA-218ENST00000560777 ZSCAN5CA6NGD5 496 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 DFFAO00273 331 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 KRT86O43790 486 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 PRAMEF11O60813 436 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 ZRANB2O95218 330 aaKnown RBP eCLIP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 KRT1P04264 644 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 CNR2P34972 360 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 CTNNA1P35221 906 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 P2RY2P41231 377 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 NBL1P41271 181 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 PEX5P50542 639 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 GEMIN4P57678 1058 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 RPS14P62263 151 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 NHLH1Q02575 133 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 PAFAH1B3Q15102 231 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 TAZQ16635 292 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 MAP7D1Q3KQU3 841 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 USP39Q53GS9 565 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 INO80DQ53TQ3 878 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 MFSD7Q6UXD7 560 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 Q6ZVU0 165 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 METTL3Q86U44 580 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 KATNAL2Q8IYT4 538 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 RCOR2Q8IZ40 523 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 OR2A12Q8NGT7 310 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 GAB3Q8WWW8 586 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 PRCCQ92733 491 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 ISG20Q96AZ6 181 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 SIPA1Q96FS4 1042 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 CEP44Q9C0F1 390 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 TNKS2Q9H2K2 1166 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 FBRSQ9HAH7 460 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 CD93Q9NPY3 652 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 LZTFL1Q9NQ48 299 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 ITM2CQ9NQX7 267 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 PPP2R2CQ9Y2T4 447 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 CAPN6Q9Y6Q1 641 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 DMDP11532 3685 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 FANCMQ8IYD8 2048 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 VPS13AQ96RL7 3174 aa12.18□□□□□ -0.46
RABGGTA-218ENST00000560777 MCF2LO15068 1137 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 BNIP3LO60238 219 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 MAFKO60675 156 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 RPP40O75818 363 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 CTNNA2P26232 953 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 SERPINB6P35237 376 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 CDKN2BP42772 138 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 SLC10A2Q12908 348 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 ELAVL3Q14576 367 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 CYTH1Q15438 398 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 ODF2Q5BJF6 829 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 CARD16Q5EG05 197 aa12.17□□□□□ -0.46
RABGGTA-218ENST00000560777 SLC9A4Q6AI14 798 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms