RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 GNA12Q03113 381 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 ARMC3Q5W041 872 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 TXNDC8Q6A555 127 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 RFWD3Q6PCD5 774 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 GAREM2Q75VX8 874 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 IGDCC3Q8IVU1 814 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 TEX26Q8N6G2 289 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 CNTD1Q8N815 330 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 DNAAF3Q8N9W5 541 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 HJURPQ8NCD3 748 aaPredicted RBP14.05□□□□□ -0.16
TPM1-215ENST00000558868 GSDMBQ8TAX9 411 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 ARHGEF2Q92974 986 aaKnown RBP14.05□□□□□ -0.16
TPM1-215ENST00000558868 ZFRQ96KR1 1074 aaKnown RBP14.05□□□□□ -0.16
TPM1-215ENST00000558868 XPO6Q96QU8 1125 aaKnown RBP14.05□□□□□ -0.16
TPM1-215ENST00000558868 CORO1BQ9BR76 489 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 WDR83Q9BRX9 315 aaKnown RBP14.05□□□□□ -0.16
TPM1-215ENST00000558868 CAPS2Q9BXY5 557 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 SLC25A51Q9H1U9 297 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 SMPD4Q9NXE4 827 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 SH3BP1Q9Y3L3 701 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 CPQQ9Y646 472 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 ANAPC1Q9H1A4 1944 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 GRM6O15303 877 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 CCL16O15467 120 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 PRAMEF11O60813 436 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 CLASP2O75122 1294 aaKnown RBP14.04□□□□□ -0.16
TPM1-215ENST00000558868 CKMP06732 381 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 RHOCP08134 193 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 EPHA5P54756 1037 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 SESN2P58004 480 aaPredicted RBP14.04□□□□□ -0.16
TPM1-215ENST00000558868 CYP4F8P98187 520 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 CDH17Q12864 832 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 MPP3Q13368 585 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 GPM6BQ13491 265 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 RFTN1Q14699 578 aaPredicted RBP14.04□□□□□ -0.16
TPM1-215ENST00000558868 LGSNQ5TDP6 509 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 STEAP4Q687X5 459 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 CASC4Q6P4E1 433 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 ZNF449Q6P9G9 518 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 Q6ZNB5 142 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 HTR3DQ70Z44 454 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 CIR1Q86X95 450 aaPredicted RBP14.04□□□□□ -0.16
TPM1-215ENST00000558868 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 CFAP52Q8N1V2 620 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 CYP2S1Q96SQ9 504 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 GORASP1Q9BQQ3 440 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 MLPHQ9BV36 600 aaPredicted RBP14.04□□□□□ -0.16
TPM1-215ENST00000558868 MAN1C1Q9NR34 630 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 VPS45Q9NRW7 570 aa14.04□□□□□ -0.16
TPM1-215ENST00000558868 MTCL1Q9Y4B5 1905 aaKnown RBP14.03□□□□□ -0.16
TPM1-215ENST00000558868 SHROOM3Q8TF72 1996 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 TCRBV9S1A1TA0A576 114 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 H3BNC9 293 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 PEX11BO96011 259 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 HLA-DQB2P05538 268 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 POLBP06746 335 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 CA3P07451 260 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 INHBAP08476 426 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 PRKCHP24723 683 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 MGAT1P26572 445 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 GRIA1P42261 906 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 OXCT1P55809 520 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 MTM1Q13496 603 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 NAB1Q13506 487 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 LBRQ14739 615 aaKnown RBP14.03□□□□□ -0.16
TPM1-215ENST00000558868 TMED2Q15363 201 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 SPANXN3Q5MJ09 141 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 ADGRD1Q6QNK2 874 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 UNC5AQ6ZN44 842 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 OTOP3Q7RTS5 596 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 CCDC117Q8IWD4 279 aaPredicted RBP14.03□□□□□ -0.16
TPM1-215ENST00000558868 FAM217AQ8IXS0 508 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 AGGF1Q8N302 714 aaeCLIP14.03□□□□□ -0.16
TPM1-215ENST00000558868 CPXM2Q8N436 756 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 MAB21L3Q8N8X9 362 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 OR52K1Q8NGK4 314 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 SLC22A17Q8WUG5 538 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 CDKL2Q92772 493 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 PABPC5Q96DU9 382 aaKnown RBP14.03□□□□□ -0.16
TPM1-215ENST00000558868 TMA16Q96EY4 203 aaKnown RBP14.03□□□□□ -0.16
TPM1-215ENST00000558868 PRICKLE1Q96MT3 831 aaPredicted RBP14.03□□□□□ -0.16
TPM1-215ENST00000558868 PAFAH2Q99487 392 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 TBL1YQ9BQ87 522 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 DHRS4Q9BTZ2 278 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 IL22Q9GZX6 179 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 LMAN2LQ9H0V9 348 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 ZDHHC7Q9NXF8 308 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 EURLQ9NYK6 297 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 TBC1D30Q9Y2I9 924 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 TTLL3Q9Y4R7 772 aa14.03□□□□□ -0.16
TPM1-215ENST00000558868 NYNRINQ9P2P1 1898 aaKnown RBP14.02□□□□□ -0.16
TPM1-215ENST00000558868 IQANK1A0A1B0GTG1 560 aa14.02□□□□□ -0.17
TPM1-215ENST00000558868 A0A1W2PRU2 124 aa14.02□□□□□ -0.17
TPM1-215ENST00000558868 J3KR12 359 aa14.02□□□□□ -0.17
TPM1-215ENST00000558868 ZNF197O14709 1029 aa14.02□□□□□ -0.17
TPM1-215ENST00000558868 KDELR3O43731 214 aa14.02□□□□□ -0.17
TPM1-215ENST00000558868 TSPAN3O60637 253 aa14.02□□□□□ -0.17
TPM1-215ENST00000558868 SHOX2O60902 331 aaPredicted RBP14.02□□□□□ -0.17
TPM1-215ENST00000558868 KRT15P19012 456 aa14.02□□□□□ -0.17
TPM1-215ENST00000558868 CES1P23141 567 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms