RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ZWINTO95229 277 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 IGLV3-19P01714 112 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PRKCBP05771 671 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 CD3EP07766 207 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 RBMY1DP0C7P1 496 aaKnown RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PAMP19021 973 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ATP2B1P20020 1258 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 AGAP20933 346 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 CD38P28907 300 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 MCM7P33993 719 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 MLH1P40692 756 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 GPC3P51654 580 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 HSD17B4P51659 736 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 MAPK10P53779 464 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PMS2P54278 862 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PPARDQ03181 441 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 FAM160A1Q05DH4 1040 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 Q0VFX4 171 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF177Q13360 481 aaPredicted RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF268Q14587 947 aaPredicted RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF235Q14590 738 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 STARD3Q14849 445 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 SYCP1Q15431 976 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 LONRF1Q17RB8 773 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 DEFB113Q30KQ7 82 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 CHRFAM7AQ494W8 412 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PRR31Q5SQ13 230 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 VAX1Q5SQQ9 334 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 SLC9C2Q5TAH2 1124 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ATF7IP2Q5U623 682 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 WWC2Q6AWC2 1192 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 EFCAB12Q6NXP0 572 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 CATSPER4Q7RTX7 472 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ITIH5Q86UX2 942 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 SFTPA1Q8IWL2 248 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 HACE1Q8IYU2 909 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 CIARTQ8N365 385 aaPredicted RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 LCORLQ8N3X6 602 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 SLC25A45Q8N413 288 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 IL31RAQ8NI17 732 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 UBE2Q2Q8WVN8 375 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 SEC14L1Q92503 715 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 SIPA1Q96FS4 1042 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PCYT2Q99447 389 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 CMKLR1Q99788 373 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 SLC25A23Q9BV35 468 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 TMEM168Q9H0V1 697 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 LINC00597Q9H2U6 94 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 C6orf106Q9H6K1 298 aaPredicted RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ARMT1Q9H993 441 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 CD248Q9HCU0 757 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 MRPL40Q9NQ50 206 aaKnown RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 AASDHPPTQ9NRN7 309 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 WHRNQ9P202 907 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 ARPP21Q9UBL0 812 aaPredicted RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PA2G4Q9UQ80 394 aaKnown RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 POLHQ9Y253 713 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PLEKHA6Q9Y2H5 1048 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 GIT1Q9Y2X7 761 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 LOXL2Q9Y4K0 774 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 PCDHGA9Q9Y5G4 932 aaKnown RBP2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 DUSP10Q9Y6W6 482 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 FER1L5A0AVI2 2057 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 STAB2Q8WWQ8 2551 aa2.33□□□□□ -2.04
TRAV1-1-201ENST00000542354 NPHP3-ACAD11A0A0J9YXS1 232 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 A0A1W2PPC4 97 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 ANKRD33BA6NCL7 494 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 A6NCN8 305 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 AGRPO00253 132 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 SYN3O14994 580 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 FFAR2O15552 330 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 MAFKO60675 156 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 MAGEC1O60732 1142 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 SDC3O75056 442 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 PPM1BO75688 479 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 CLDN14O95500 239 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 C22orf31O95567 290 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 SEMA4FO95754 770 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 FAM157CP0CG43 387 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 ITIH1P19827 911 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 DGKAP23743 735 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TACR1P25103 407 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 NFKBIAP25963 317 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 POLR2BP30876 1174 aaKnown RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 UGT1A3P35503 534 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 PBX1P40424 430 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 CLCN3P51790 818 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 ZNF132P52740 706 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 SMSP52788 366 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 NXPH1P58417 271 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 PPP2CBP62714 309 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 PPP2CAP67775 309 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 NKX6-1P78426 367 aaPredicted RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 MRPS9P82933 396 aaKnown RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TFAP4Q01664 338 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 KRTAP1-1Q07627 177 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 DMTNQ08495 405 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TUSC3Q13454 348 aa2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 PRKD1Q15139 912 aaPredicted RBP2.32□□□□□ -2.04
TRAV1-1-201ENST00000542354 TAF12Q16514 161 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms