RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 VPS28Q9UK41 221 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 TRIM64A6NGJ6 449 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 TRIM38O00635 465 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 ARHGAP33O14559 1287 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 ZBTB5O15062 677 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 RALBP11234 206 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 CDH1P12830 882 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 ZNF543Q08ER8 600 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 GRSF1Q12849 480 aaKnown RBP eCLIP10.36□□□□□ -0.75
SPIDR-224ENST00000524126 PPP4R4Q6NUP7 873 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 NAPRTQ6XQN6 538 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 EPHX4Q8IUS5 362 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 ESX1Q8N693 406 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 LPGAT1Q92604 370 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 SGCDQ92629 289 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 FAF2Q96CS3 445 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 NACC1Q96RE7 527 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 APBA2Q99767 749 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 EMILIN2Q9BXX0 1053 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 B3GNT4Q9C0J1 378 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 GLT8D2Q9H1C3 349 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 PNPLA8Q9NP80 782 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 CYP26B1Q9NR63 512 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 TMEM9Q9P0T7 183 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 CRNNQ9UBG3 495 aaPredicted RBP10.36□□□□□ -0.75
SPIDR-224ENST00000524126 PSME2Q9UL46 239 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 UGT2A1Q9Y4X1 527 aa10.36□□□□□ -0.75
SPIDR-224ENST00000524126 SIPA1L1O43166 1804 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 PCM1Q15154 2024 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 TCP10L2B9ZVM9 353 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 GPR25O00155 361 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 TPP1O14773 563 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 GDF11O95390 407 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 PRKCHP24723 683 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 NOMO3P69849 1222 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 OCA2Q04671 838 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 MERTKQ12866 999 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 KCNJ11Q14654 390 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 SMU1Q2TAY7 513 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 EML3Q32P44 896 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 KRT39Q6A163 491 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 UNC5AQ6ZN44 842 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 TNS4Q8IZW8 715 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 MPP5Q8N3R9 675 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 TRIB2Q92519 343 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 FIG4Q92562 907 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 SH2D3AQ9BRG2 576 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 LHPPQ9H008 270 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 RMND5AQ9H871 391 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 MRPL47Q9HD33 250 aaKnown RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 WDR6Q9NNW5 1121 aaKnown RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 HMG20AQ9NP66 347 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 THG1LQ9NWX6 298 aaKnown RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 C3orf70A6NLC5 250 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 E7ENX8 843 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 IDH3BO43837 385 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 TPST1O60507 370 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 HSPA4LO95757 839 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 F7P08709 466 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 EEF1B2P24534 225 aaKnown RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 SERPINB1P30740 379 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 SHMT1P34896 483 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 TMBIM6P55061 237 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 NME5P56597 212 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 ECT2LQ008S8 904 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 CHRNEQ04844 493 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 TREML2Q5T2D2 321 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 PRR23CQ6ZRP0 262 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 LDHDQ86WU2 507 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 BEND7Q8N7W2 519 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 RP9Q8TA86 221 aaKnown RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 DEPDC1BQ8WUY9 529 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 OSCP1Q8WVF1 389 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 STRA6Q9BX79 667 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 RETREG1Q9H6L5 497 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 RBAKQ9NYW8 714 aaPredicted RBP10.35□□□□□ -0.75
SPIDR-224ENST00000524126 TMEM216Q9P0N5 145 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 IP6K2Q9UHH9 426 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 PCDHA1Q9Y5I3 950 aa10.35□□□□□ -0.75
SPIDR-224ENST00000524126 NFKBIEO00221 500 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 MEIS2O14770 477 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 ALDOAP04075 364 aaKnown RBP10.34□□□□□ -0.75
SPIDR-224ENST00000524126 BMP4P12644 408 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 MAGP20916 626 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 MPSTP25325 297 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 HMGB2P26583 209 aaKnown RBP10.34□□□□□ -0.75
SPIDR-224ENST00000524126 HARS2P49590 506 aaKnown RBP10.34□□□□□ -0.75
SPIDR-224ENST00000524126 P2RX3P56373 397 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 RHDQ02161 417 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 FPGSQ05932 587 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 GABPAQ06546 454 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 FXNQ16595 210 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 QRICH1Q2TAL8 776 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 SNAP47Q5SQN1 464 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 NXNQ6DKJ4 435 aa10.34□□□□□ -0.75
SPIDR-224ENST00000524126 RSBN1LQ6PCB5 846 aaPredicted RBP10.34□□□□□ -0.75
SPIDR-224ENST00000524126 PIGZQ86VD9 579 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms