RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 MT-CO1P00395 513 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 EPHA8P29322 1005 aaPredicted RBP20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 OR1E1P30953 314 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 CHRNA3P32297 505 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 RECQLP46063 649 aaPredicted RBP20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 NOMO3P69849 1222 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 SHBQ15464 509 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 PRAMEF14Q5SWL7 426 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 RETSATQ6NUM9 610 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 CLEC17AQ6ZS10 378 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 GATAD2AQ86YP4 633 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 OR2A12Q8NGT7 310 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 RETREG1Q9H6L5 497 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 DYRK4Q9NR20 520 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 DMXL2Q8TDJ6 3036 aa20.44■□□□□ 0.86
UBE2D3-220ENST00000505307 COL5A1P20908 1838 aaPredicted RBP20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 CXorf51AA0A1B0GTR3 108 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 GOLGA8SH3BPF8 625 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 PLK4O00444 970 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 ENC1O14682 589 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 SNAP91O60641 907 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 ENDOD1O94919 500 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 LDOC1O95751 146 aaPredicted RBP20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 MMEP08473 750 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 NAA35Q5VZE5 725 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 TFAP2DQ7Z6R9 452 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 TMPRSS12Q86WS5 348 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 CPA5Q8WXQ8 436 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 ZYG11BQ9C0D3 744 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 TAB2Q9NYJ8 693 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 MPP6Q9NZW5 540 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 PPARGC1AQ9UBK2 798 aaKnown RBP20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 PLXNB3Q9ULL4 1909 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 PTPRBP23467 1997 aa20.43■□□□□ 0.86
UBE2D3-220ENST00000505307 A0A0D9SEW6 157 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 KPNA3O00505 521 aaPredicted RBP20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 SRGAP2O75044 1071 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 MAT2AP31153 395 aaKnown RBP20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 CDR2Q01850 454 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 ARL13BQ3SXY8 428 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 POM121L1PQ3SYA9 428 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 FKBP15Q5T1M5 1219 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 PIP5KL1Q5T9C9 394 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 TRIM72Q6ZMU5 477 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 PPP1R16AQ96I34 528 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 CNDP2Q96KP4 475 aaKnown RBP20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 CFAP57Q96MR6 1250 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 CEP44Q9C0F1 390 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 NOCTQ9UK39 431 aaKnown RBP20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 SNX10Q9Y5X0 201 aa20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 ANKRD11Q6UB99 2663 aaPredicted RBP20.42■□□□□ 0.86
UBE2D3-220ENST00000505307 CYP1A1P04798 512 aaPredicted RBP20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 CTSLP07711 333 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 MMP8P22894 467 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 RRM1P23921 792 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 ETFBP38117 255 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 TAS2R38P59533 333 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 NRG1Q02297 640 aaPredicted RBP20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 CDKAL1Q5VV42 579 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 C22orf39Q6P5X5 142 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 FAM131BQ86XD5 332 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 PDCD7Q8N8D1 485 aaKnown RBP20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 KLHDC7BQ96G42 594 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 HDAC8Q9BY41 377 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 VPS16Q9H269 839 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 GANQ9H2C0 597 aa20.41■□□□□ 0.86
UBE2D3-220ENST00000505307 K7ERQ8 282 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 CBX4O00257 560 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 SMAD6O43541 496 aaKnown RBP20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 GFPT2O94808 682 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 SOX5P35711 763 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 ILKQ13418 452 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 GOLGA4Q13439 2230 aaKnown RBP20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 KRT31Q15323 416 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 C2CD6Q53TS8 623 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 CCDC157Q569K6 752 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 SFMBT2Q5VUG0 894 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 TRNP1Q6NT89 227 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 DHRS13Q6UX07 377 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 ERN2Q76MJ5 926 aaKnown RBP20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 HORMAD1Q86X24 394 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 SPATS2Q86XZ4 545 aaKnown RBP20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 EID2Q8N6I1 236 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 PCDH20Q8N6Y1 951 aaKnown RBP20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 TMEM145Q8NBT3 493 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 OR7D4Q8NG98 312 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 FAM174AQ8TBP5 190 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 SPON2Q9BUD6 331 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 ATP13A1Q9HD20 1204 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 METTL5Q9NRN9 209 aaKnown RBP20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 TMPRSS4Q9NRS4 437 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 ZNF212Q9UDV6 495 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 IL36AQ9UHA7 158 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 LHX6Q9UPM6 363 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 FREM2Q5SZK8 3169 aa20.4■□□□□ 0.86
UBE2D3-220ENST00000505307 KNTC1P50748 2209 aa20.39■□□□□ 0.86
UBE2D3-220ENST00000505307 TRABD2BA6NFA1 517 aa20.39■□□□□ 0.85
UBE2D3-220ENST00000505307 RFPL3O75679 317 aa20.39■□□□□ 0.85
UBE2D3-220ENST00000505307 SDC4P31431 198 aa20.39■□□□□ 0.85
UBE2D3-220ENST00000505307 AKT2P31751 481 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms