RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 SRCP12931 536 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 TDGF1P13385 188 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 CNR2P34972 360 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 RECQLP46063 649 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 NUMBP49757 651 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 PAPOLAP51003 745 aaKnown RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 RWDD2BP57060 319 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 COPS2P61201 443 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 ARF5P84085 180 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 SFSWAPQ12872 951 aaKnown RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 BYSLQ13895 437 aaKnown RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 TFDP2Q14188 446 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 PAFAH1B3Q15102 231 aaKnown RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 DLG2Q15700 870 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 INO80DQ53TQ3 878 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 KIAA1211LQ6NV74 962 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 TSSK4Q6SA08 328 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 DSG4Q86SJ6 1040 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 NT5DC3Q86UY8 548 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 WDR5BQ86VZ2 330 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 RASSF3Q86WH2 238 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 CCDC50Q8IVM0 306 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 PRSS33Q8NF86 280 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 HMGB4Q8WW32 186 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 ATRIPQ8WXE1 791 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 NELL1Q92832 810 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 ISG20Q96AZ6 181 aaKnown RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 RNF25Q96BH1 459 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 CELF6Q96J87 481 aaKnown RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 ZNF830Q96NB3 372 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 SLC39A8Q9C0K1 460 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 SP110Q9HB58 689 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 PRSS16Q9NQE7 514 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 ETNK2Q9NVF9 386 aa16.32■□□□□ 0.2
SSBP1-214ENST00000498107 ARIH1Q9Y4X5 557 aaPredicted RBP16.32■□□□□ 0.2
SSBP1-214ENST00000498107 C3orf70A6NLC5 250 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-214ENST00000498107 APOL1O14791 398 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 ALOX15BO15296 676 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 MX2P20592 715 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 GLDCP23378 1020 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 ZBTB16Q05516 673 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 ELAVL3Q14576 367 aaKnown RBP16.31■□□□□ 0.2
SSBP1-214ENST00000498107 TFDP3Q5H9I0 405 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 TMCO4Q5TGY1 634 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 HEATR6Q6AI08 1181 aaKnown RBP16.31■□□□□ 0.2
SSBP1-214ENST00000498107 MFSD7Q6UXD7 560 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 LINGO4Q6UY18 593 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 BZW1Q7L1Q6 419 aaKnown RBP16.31■□□□□ 0.2
SSBP1-214ENST00000498107 RFX6Q8HWS3 928 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 ARHGAP12Q8IWW6 846 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 ATPAF2Q8N5M1 289 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 PCDH20Q8N6Y1 951 aaKnown RBP16.31■□□□□ 0.2
SSBP1-214ENST00000498107 NPWQ8N729 165 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 ZNF366Q8N895 744 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 TRIM58Q8NG06 486 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 PRCCQ92733 491 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-214ENST00000498107 KCNF1Q9H3M0 494 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 CD248Q9HCU0 757 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 POLR3BQ9NW08 1133 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-214ENST00000498107 UBA2Q9UBT2 640 aaPredicted RBP16.31■□□□□ 0.2
SSBP1-214ENST00000498107 CAPN6Q9Y6Q1 641 aa16.31■□□□□ 0.2
SSBP1-214ENST00000498107 H0Y858 1186 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 PRAMEF11O60813 436 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 SIN3BO75182 1162 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 ZNF217O75362 1048 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 MT-CO1P00395 513 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 GABRG2P18507 467 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 FNTBP49356 437 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 IL10RBQ08334 325 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 TCF15Q12870 199 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 RFTN1Q14699 578 aaPredicted RBP16.3■□□□□ 0.2
SSBP1-214ENST00000498107 PPP2R5EQ16537 467 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 USP39Q53GS9 565 aaKnown RBP16.3■□□□□ 0.2
SSBP1-214ENST00000498107 C9orf64Q5T6V5 341 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 ZNF776Q68DI1 518 aaPredicted RBP16.3■□□□□ 0.2
SSBP1-214ENST00000498107 NCBP2-AS2Q69YL0 99 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 SLC9A4Q6AI14 798 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 C22orf39Q6P5X5 142 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 SPOCD1Q6ZMY3 1216 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 C11orf74Q86VG3 221 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 TMPRSS6Q8IU80 811 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 PLPP6Q8IY26 295 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 PQLC3Q8N755 202 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 MDGA1Q8NFP4 955 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 FRS2Q8WU20 508 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 NSMCE1Q8WV22 266 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 OR8D1Q8WZ84 308 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 KRT35Q92764 455 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 SIPA1Q96FS4 1042 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 ZNF599Q96NL3 588 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 IPO11Q9UI26 975 aaKnown RBP16.3■□□□□ 0.2
SSBP1-214ENST00000498107 SCML1Q9UN30 329 aa16.3■□□□□ 0.2
SSBP1-214ENST00000498107 MUC6Q6W4X9 2439 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 GOLGA6L9A6NEM1 432 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 FTCDO95954 541 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 ACADMP11310 421 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 NDUFV2P19404 249 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 CDKN2BP42772 138 aa16.29■□□□□ 0.2
SSBP1-214ENST00000498107 PEX5P50542 639 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms