RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 TSC1Q92574 1164 aa13.88□□□□□ -0.19
FDPS-219ENST00000495308 PRCCQ92733 491 aaPredicted RBP13.88□□□□□ -0.19
FDPS-219ENST00000495308 NKD2Q969F2 451 aaPredicted RBP13.88□□□□□ -0.19
FDPS-219ENST00000495308 FAM122AQ96E09 287 aa13.88□□□□□ -0.19
FDPS-219ENST00000495308 SIPA1Q96FS4 1042 aa13.88□□□□□ -0.19
FDPS-219ENST00000495308 CALN1Q9BXU9 219 aa13.88□□□□□ -0.19
FDPS-219ENST00000495308 TNKS2Q9H2K2 1166 aa13.88□□□□□ -0.19
FDPS-219ENST00000495308 LRRC19Q9H756 370 aa13.88□□□□□ -0.19
FDPS-219ENST00000495308 SMG5Q9UPR3 1016 aaKnown RBP13.88□□□□□ -0.19
FDPS-219ENST00000495308 NUMA1Q14980 2115 aa13.88□□□□□ -0.19
FDPS-219ENST00000495308 TARSL2A2RTX5 802 aaKnown RBP13.87□□□□□ -0.19
FDPS-219ENST00000495308 PROB1E7EW31 1015 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 PJA2O43164 708 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 KDELR3O43731 214 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 IL4RP24394 825 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 PLA2G5P39877 138 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 MRE11P49959 708 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
FDPS-219ENST00000495308 NDST2P52849 883 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 YBEYP58557 167 aaPredicted RBP13.87□□□□□ -0.19
FDPS-219ENST00000495308 RPS14P62263 151 aaKnown RBP13.87□□□□□ -0.19
FDPS-219ENST00000495308 SERINC3Q13530 473 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 PARP15Q460N3 678 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 C22orf39Q6P5X5 142 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 KBTBD6Q86V97 674 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 LRRC8AQ8IWT6 810 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 SUMF1Q8NBK3 374 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 TPCN2Q8NHX9 752 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 FAM71BQ8TC56 605 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 RAPGEF5Q92565 580 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 SLC39A8Q9C0K1 460 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 RSPH9Q9H1X1 276 aaPredicted RBP13.87□□□□□ -0.19
FDPS-219ENST00000495308 TRIM10Q9UDY6 481 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 MBD1Q9UIS9 605 aaPredicted RBP13.87□□□□□ -0.19
FDPS-219ENST00000495308 HPCAL4Q9UM19 191 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 FCF1Q9Y324 198 aaKnown RBP13.87□□□□□ -0.19
FDPS-219ENST00000495308 ALG6Q9Y672 507 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 SDK1Q7Z5N4 2213 aa13.87□□□□□ -0.19
FDPS-219ENST00000495308 IGHV1OR15-9A0A0B4J2B8 117 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 LRRD1A4D1F6 860 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 BTNL10A8MVZ5 291 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 J3KR12 359 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 DFFAO00273 331 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 LMNAP02545 664 aaKnown RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 ACADMP11310 421 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 SLC1A1P43005 524 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 PSMD8P48556 350 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 PAPOLAP51003 745 aaKnown RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 NAP1L1P55209 391 aaKnown RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 CCZ1BP86790 482 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 CCZ1P86791 482 aaPredicted RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 AFMIDQ63HM1 303 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 ZNF776Q68DI1 518 aaPredicted RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 C11orf63Q6NUN7 778 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 TMCO3Q6UWJ1 677 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 ARHGAP36Q6ZRI8 547 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 ASCL5Q7RTU5 278 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 DAAM2Q86T65 1068 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 FAM124AQ86V42 546 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 MMAAQ8IVH4 418 aaKnown RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 RHOT1Q8IXI2 618 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 PCDH19Q8TAB3 1148 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 SPACA7Q96KW9 195 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 FAM129BQ96TA1 746 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 DUSP15Q9H1R2 295 aaPredicted RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 FBRSQ9HAH7 460 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 DONSONQ9NYP3 566 aa13.86□□□□□ -0.19
FDPS-219ENST00000495308 USP36Q9P275 1121 aaKnown RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 RCOR3Q9P2K3 495 aaPredicted RBP13.86□□□□□ -0.19
FDPS-219ENST00000495308 MID1O15344 667 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 ARHGAP6O43182 974 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 RNASEH1O60930 286 aaKnown RBP13.85□□□□□ -0.19
FDPS-219ENST00000495308 ZNF821O75541 412 aaPredicted RBP13.85□□□□□ -0.19
FDPS-219ENST00000495308 DNTTP04053 509 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 KRT1P04264 644 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 KDELR1P24390 212 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 MARCKSL1P49006 195 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 TPMTP51580 245 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 CLCN6P51797 869 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 METAP1P53582 386 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 ELAVL3Q14576 367 aaKnown RBP13.85□□□□□ -0.19
FDPS-219ENST00000495308 PDK2Q15119 407 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 CST6Q15828 149 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 PLK5Q496M5 336 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 ANKRD20A8PQ5CZ79 823 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 CHST14Q8NCH0 376 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 CCDC112Q8NEF3 446 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 OR2A12Q8NGT7 310 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 ZNF670Q9BS34 389 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 TM6SF2Q9BZW4 377 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 SEMA4AQ9H3S1 761 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 PDFQ9HBH1 243 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 ITM2CQ9NQX7 267 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 RAB23Q9ULC3 237 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 ADGRG1Q9Y653 693 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 GPR179Q6PRD1 2367 aa13.85□□□□□ -0.19
FDPS-219ENST00000495308 OTOGLQ3ZCN5 2332 aa13.84□□□□□ -0.19
FDPS-219ENST00000495308 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.84□□□□□ -0.19
FDPS-219ENST00000495308 MACROD2A1Z1Q3 448 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms