RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 MAP7D1Q3KQU3 841 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 ZFYVE27Q5T4F4 411 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 C11orf63Q6NUN7 778 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 KIAA1324Q6UXG2 1013 aaKnown RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 METTL3Q86U44 580 aaKnown RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 MAP7D3Q8IWC1 876 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 TP53INP2Q8IXH6 220 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 RHOT1Q8IXI2 618 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 STK40Q8N2I9 435 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 LZTR1Q8N653 840 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 FRMD1Q8N878 549 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 NETO2Q8NC67 525 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 CALR3Q96L12 384 aaKnown RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 ZNF670Q9BS34 389 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 CALN1Q9BXU9 219 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 RSPH9Q9H1X1 276 aaPredicted RBP13.83□□□□□ -0.2
COL1A1-208ENST00000494334 EPC1Q9H2F5 836 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 SEMA4AQ9H3S1 761 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 FBRSQ9HAH7 460 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 CD93Q9NPY3 652 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 TRIM10Q9UDY6 481 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 ADGRG1Q9Y653 693 aa13.83□□□□□ -0.2
COL1A1-208ENST00000494334 ZNF217O75362 1048 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-208ENST00000494334 PAPOLAP51003 745 aaKnown RBP13.82□□□□□ -0.2
COL1A1-208ENST00000494334 BYSLQ13895 437 aaKnown RBP13.82□□□□□ -0.2
COL1A1-208ENST00000494334 ANKRD20A8PQ5CZ79 823 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 TMCO3Q6UWJ1 677 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 LEKR1Q6ZMV7 388 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 Q6ZVU0 165 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 DAAM2Q86T65 1068 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 CACUL1Q86Y37 369 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 TXLNBQ8N3L3 684 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 FAM160A2Q8N612 972 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-208ENST00000494334 SUMF1Q8NBK3 374 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 PCDH19Q8TAB3 1148 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 NKD2Q969F2 451 aaPredicted RBP13.82□□□□□ -0.2
COL1A1-208ENST00000494334 FAF2Q96CS3 445 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 ITM2CQ9NQX7 267 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 USP36Q9P275 1121 aaKnown RBP13.82□□□□□ -0.2
COL1A1-208ENST00000494334 CYP8B1Q9UNU6 501 aa13.82□□□□□ -0.2
COL1A1-208ENST00000494334 FCF1Q9Y324 198 aaKnown RBP13.82□□□□□ -0.2
COL1A1-208ENST00000494334 IGHV1OR15-9A0A0B4J2B8 117 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 LRRD1A4D1F6 860 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 ZSCAN5CA6NGD5 496 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-208ENST00000494334 ARHGAP42A6NI28 874 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 C3orf70A6NLC5 250 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-208ENST00000494334 J3KR12 359 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 DFFAO00273 331 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 MCF2LO15068 1137 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 BNIP3LO60238 219 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 ACADMP11310 421 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 BCKDHBP21953 392 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 TPMTP51580 245 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 GEMIN4P57678 1058 aaKnown RBP13.81□□□□□ -0.2
COL1A1-208ENST00000494334 ZBTB16Q05516 673 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 ELAVL3Q14576 367 aaKnown RBP13.81□□□□□ -0.2
COL1A1-208ENST00000494334 GSE1Q14687 1217 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 ZNF776Q68DI1 518 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-208ENST00000494334 C22orf39Q6P5X5 142 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 ARHGAP36Q6ZRI8 547 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 PRR23BQ6ZRT6 265 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 CEP68Q76N32 757 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 KBTBD6Q86V97 674 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 MMAAQ8IVH4 418 aaKnown RBP13.81□□□□□ -0.2
COL1A1-208ENST00000494334 OR2A12Q8NGT7 310 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 CEP44Q9C0F1 390 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 TNKS2Q9H2K2 1166 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 PDFQ9HBH1 243 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 DDX56Q9NY93 547 aaKnown RBP13.81□□□□□ -0.2
COL1A1-208ENST00000494334 MBD1Q9UIS9 605 aaPredicted RBP13.81□□□□□ -0.2
COL1A1-208ENST00000494334 CKAP5Q14008 2032 aa13.81□□□□□ -0.2
COL1A1-208ENST00000494334 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 MACROD2A1Z1Q3 448 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 GRID2IPA4D2P6 1211 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 PSTPIP1O43586 416 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 PRAMEF11O60813 436 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 RNASEH1O60930 286 aaKnown RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 LMNAP02545 664 aaKnown RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 DNTTP04053 509 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 KRT1P04264 644 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 SERPINB6P35237 376 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 PAFAH1B3Q15102 231 aaKnown RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 LPAL2Q16609 132 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 PLK5Q496M5 336 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 INO80DQ53TQ3 878 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 NCBP2-AS2Q69YL0 99 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 VSIG1Q86XK7 387 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 PCDH20Q8N6Y1 951 aaKnown RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 PQLC3Q8N755 202 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 LRRC57Q8N9N7 239 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 KIAA1524Q8TCG1 905 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 CASKIN2Q8WXE0 1202 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 OR8D1Q8WZ84 308 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 ANP32BQ92688 251 aaKnown RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 ISG20Q96AZ6 181 aaKnown RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 RNF25Q96BH1 459 aaPredicted RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 ZC3H10Q96K80 434 aaKnown RBP13.8□□□□□ -0.2
COL1A1-208ENST00000494334 SPACA7Q96KW9 195 aa13.8□□□□□ -0.2
COL1A1-208ENST00000494334 RNF157Q96PX1 679 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms