RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 CPOXP36551 454 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 GARSP41250 739 aaKnown RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 CPA2P48052 419 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 OAZ1P54368 228 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 SLC37A1P57057 533 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 OLR1P78380 273 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 ZBED6P86452 979 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 TMEM115Q12893 351 aaPredicted RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 LMAN2Q12907 356 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 CRYMQ14894 314 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 MED22Q15528 200 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 TXNRD1Q16881 649 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 GPR139Q6DWJ6 353 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 NAA16Q6N069 864 aaPredicted RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 MTFR2Q6P444 385 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 TMEM154Q6P9G4 183 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 FAM83HQ6ZRV2 1179 aaPredicted RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 RD3Q7Z3Z2 195 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 WDR53Q7Z5U6 358 aaPredicted RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 GPR149Q86SP6 731 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 ADGRF3Q8IZF5 1079 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 ADGRF2Q8IZF7 708 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 C17orf53Q8N3J3 647 aaPredicted RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 LINC01465Q8N7H1 131 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 PLD5Q8N7P1 536 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 FRMD1Q8N878 549 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 NTN5Q8WTR8 489 aaPredicted RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 POMGNT1Q8WZA1 660 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 AKAP1Q92667 903 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 JAKMIP2Q96AA8 810 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 FAM149B1Q96BN6 582 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 INTS12Q96CB8 462 aaKnown RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 COQ10AQ96MF6 247 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 MAK16Q9BXY0 300 aaKnown RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 FTOQ9C0B1 505 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 ZCCHC17Q9NP64 241 aaKnown RBP4.83□□□□□ -1.64
VPS13A-211ENST00000484581 HDAC6Q9UBN7 1215 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 COX11Q9Y6N1 276 aa4.83□□□□□ -1.64
VPS13A-211ENST00000484581 SPATA31A1Q5TZJ5 1347 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 SPATA31A6Q5VVP1 1343 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 A0A0U1RQG5 324 aaPredicted RBP4.82□□□□□ -1.64
VPS13A-211ENST00000484581 C17orf113A0A1B0GUU1 675 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 UNC119BA6NIH7 251 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 TSPY2A6NKD2 308 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 C17orf100A8MU93 164 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 TTC34A8MYJ7 566 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 MYO1GB0I1T2 1018 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 YY2O15391 372 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 MPPED1O15442 326 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 CHRM2P08172 466 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 CLTBP09497 229 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 TSPY3P0CV98 308 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 TSPY8P0CW00 308 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 GSTM2P28161 218 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 PBX3P40426 434 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 EIF2DP41214 584 aaKnown RBP4.82□□□□□ -1.64
VPS13A-211ENST00000484581 AGTR2P50052 363 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 KRT83P78385 493 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 TSPY1Q01534 308 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 CFHR3Q02985 330 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 GOLGA8DPQ0D2H9 430 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 TP53BP2Q13625 1128 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 IL13RA2Q14627 380 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 SLC18A3Q16572 532 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 AP5B1Q2VPB7 878 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 PLAC9Q5JTB6 97 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 NAPEPLDQ6IQ20 393 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 SARM1Q6SZW1 724 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 KIRREL2Q6UWL6 708 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 C17orf99Q6UX52 265 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 ZNF551Q7Z340 670 aaPredicted RBP4.82□□□□□ -1.64
VPS13A-211ENST00000484581 VPS52Q8N1B4 723 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 C11orf65Q8NCR3 313 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 ABHD11Q8NFV4 315 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 NEK9Q8TD19 979 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 SMARCE1Q969G3 411 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 KAZALD1Q96I82 304 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 FBXL20Q96IG2 436 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 FSD1LQ9BXM9 530 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 SMARCAD1Q9H4L7 1026 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 ARHGEF3Q9NR81 526 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 DUSP22Q9NRW4 184 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 IL1RAPL1Q9NZN1 696 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 PEMTQ9UBM1 199 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 HSPB7Q9UBY9 170 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 B3GNT3Q9Y2A9 372 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 PKP3Q9Y446 797 aa4.82□□□□□ -1.64
VPS13A-211ENST00000484581 EPN1Q9Y6I3 576 aaPredicted RBP4.82□□□□□ -1.64
VPS13A-211ENST00000484581 PIPSLA2A3N6 862 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 SH2B2O14492 632 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 DSCR3O14972 297 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 CSPG5O95196 566 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 ALDOCP09972 364 aaKnown RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 NPSP0C0P6 89 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 CDK4P11802 303 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 ZNF8P17098 575 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 HOXB9P17482 250 aaPredicted RBP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 SFPQP23246 707 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS13A-211ENST00000484581 MCCP23508 829 aa4.81□□□□□ -1.64
VPS13A-211ENST00000484581 TTKP33981 857 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms