RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	FAM90A12P	A8MX19	464 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	FAM90A23P	A8MXZ1	464 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	ZNF814	B7Z6K7	855 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	HBP1	O60381	514 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	DDAH2	O95865	285 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	XBP1	P17861	261 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	SLC16A2	P36021	539 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	TUB	P50607	506 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	ZNF81	P51508	661 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	MAPK7	Q13164	816 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	NAA25	Q14CX7	972 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	NFIL3	Q16649	462 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	FBXO43	Q4G163	708 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	TMEM268	Q5VZI3	342 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	RETSAT	Q6NUM9	610 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	KDELC2	Q7Z4H8	507 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	HEATR4	Q86WZ0	1026 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	SETD9	Q8NE22	299 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	FAR1	Q8WVX9	515 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	HVCN1	Q96D96	273 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	MSI2	Q96DH6	328 aa	Known RBP	4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	TBATA	Q96M53	351 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	WDR83	Q9BRX9	315 aa	Known RBP	4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	TRMO	Q9BU70	441 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	PHF7	Q9BWX1	381 aa	Predicted RBP	4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	NPL	Q9BXD5	320 aa	Predicted RBP	4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	LMAN2L	Q9H0V9	348 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	ACTR5	Q9H9F9	607 aa	Predicted RBP	4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	ELOVL5	Q9NYP7	299 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	NLK	Q9UBE8	527 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	GJD2	Q9UKL4	321 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	HS3ST3B1	Q9Y662	390 aa		4.59	□□□□□ -1.67
RBM39-231	ENST00000477334	TRBV5-7	A0A0A0MS05	114 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	OR6C68	A6NDL8	312 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	PPEF2	O14830	753 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	NDUFB8	O95169	186 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	IFIT1	P09914	478 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	TMPRSS3	P57727	454 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	INPP5J	Q15735	1006 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	SLC18A3	Q16572	532 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	SYTL3	Q4VX76	610 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	MMS22L	Q6ZRQ5	1243 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	LRRC8D	Q7L1W4	858 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	MRPL10	Q7Z7H8	261 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	ADGRG6	Q86SQ4	1221 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	PIP4P1	Q86T03	277 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	WDR5B	Q86VZ2	330 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	GPSM1	Q86YR5	675 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	GHDC	Q8N2G8	530 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	SLC25A41	Q8N5S1	370 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	DPP10	Q8N608	796 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	NRAC	Q8N912	160 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	LRRC57	Q8N9N7	239 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	LSM14A	Q8ND56	463 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	RFWD2	Q8NHY2	731 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	RUFY2	Q8WXA3	655 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	CENPI	Q92674	756 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	SH3KBP1	Q96B97	665 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	EVI5L	Q96CN4	794 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	FRG2B	Q96QU4	278 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	CD180	Q99467	661 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	CLSTN3	Q9BQT9	956 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	TTYH1	Q9H313	450 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	FOXP1	Q9H334	677 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	SLC32A1	Q9H598	525 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	CXorf56	Q9H5V9	222 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	PNRC2	Q9NPJ4	139 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	WASH6P	Q9NQA3	447 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	CDH22	Q9UJ99	828 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	ANAPC4	Q9UJX5	808 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	PCDHA12	Q9UN75	941 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	OSGIN2	Q9Y236	505 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	RAP2C	Q9Y3L5	183 aa		4.58	□□□□□ -1.68
RBM39-231	ENST00000477334	MST1R	Q04912	1400 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	TMEM272	A0A1B0GTI8	110 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	PER2	O15055	1255 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	ATG13	O75143	517 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	MOSPD3	O75425	235 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	TMCC1	O94876	653 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	PAX3	P23760	479 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	PSMC2	P35998	433 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	ME1	P48163	572 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	PLCD1	P51178	756 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	ASPHD1	Q5U4P2	390 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	NUGGC	Q68CJ6	796 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	C11orf87	Q6NUJ2	197 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	SLC22A25	Q6T423	547 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	ARFGAP1	Q8N6T3	406 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	DNAAF1	Q8NEP3	725 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	HDAC7	Q8WUI4	952 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	TMEM174	Q8WUU8	243 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	CNOT9	Q92600	299 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	EPHX3	Q9H6B9	360 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	DECR2	Q9NUI1	292 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	ZDHHC7	Q9NXF8	308 aa		4.57	□□□□□ -1.68
RBM39-231	ENST00000477334	CNOT7	Q9UIV1	285 aa	Known RBP	4.57	□□□□□ -1.68

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