RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 C5AR2Q9P296 337 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 CROTQ9UKG9 612 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 PAXBP1Q9Y5B6 917 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 OTOFQ9HC10 1997 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 ATAD5Q96QE3 1844 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 CCDC78A2IDD5 438 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 BTBD19C9JJ37 291 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 PTGES3LE9PB15 166 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 PDHXO00330 501 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 SH2B2O14492 632 aaPredicted RBP4.82□□□□□ -1.64
CFHR3-205ENST00000471440 VILLO15195 856 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 MTSS1O43312 755 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 TNFSF14O43557 240 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 VIPP01282 170 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 SNHG28P0DPA3 235 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 NTSR1P30989 418 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 SLC5A2P31639 672 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 KIF5BP33176 963 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 PSMC2P35998 433 aaKnown RBP4.82□□□□□ -1.64
CFHR3-205ENST00000471440 GNAQP50148 359 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 SLURP1P55000 103 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 EVCP57679 992 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 RPP30P78346 268 aaKnown RBP4.82□□□□□ -1.64
CFHR3-205ENST00000471440 PPARDQ03181 441 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 LRMPQ12912 555 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 SP140Q13342 867 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 MAMLD1Q13495 774 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 ATP1A4Q13733 1029 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 RABEP1Q15276 862 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 RPS6KA2Q15349 733 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 ASPRV1Q53RT3 343 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 DNAJC21Q5F1R6 531 aaKnown RBP4.82□□□□□ -1.64
CFHR3-205ENST00000471440 PRR31Q5SQ13 230 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 IKBIPQ70UQ0 350 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 CHST3Q7LGC8 479 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 FAM160B2Q86V87 743 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 GAS2L3Q86XJ1 694 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 ELP4Q96EB1 424 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 KTI12Q96EK9 354 aaPredicted RBP4.82□□□□□ -1.64
CFHR3-205ENST00000471440 PARK7Q99497 189 aaKnown RBP4.82□□□□□ -1.64
CFHR3-205ENST00000471440 ZCCHC4Q9H5U6 513 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 RPAP3Q9H6T3 665 aaPredicted RBP4.82□□□□□ -1.64
CFHR3-205ENST00000471440 PLA2G3Q9NZ20 509 aa4.82□□□□□ -1.64
CFHR3-205ENST00000471440 VSX1Q9NZR4 365 aaPredicted RBP4.82□□□□□ -1.64
CFHR3-205ENST00000471440 GREB1LQ9C091 1923 aaPredicted RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 KDM3AQ9Y4C1 1321 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 AGPSO00116 658 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 MYO1CO00159 1063 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 ADAM20O43506 726 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 CBFA2T3O75081 653 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 HEXIM1O94992 359 aaKnown RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 TFRCP02786 760 aaKnown RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 INHBBP09529 407 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 PDHBP11177 359 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 PEPDP12955 493 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 CD6P30203 668 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 CASRP41180 1078 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 GCLCP48506 637 aaPredicted RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 MCM2P49736 904 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 STAT2P52630 851 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 SNX16P57768 344 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 IRX3P78415 501 aaPredicted RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 PLIN5Q00G26 463 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 TROAPQ12815 778 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 PTP4A2Q12974 167 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 EIF4HQ15056 248 aaKnown RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 WDR72Q3MJ13 1102 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 UTP14CQ5TAP6 766 aaKnown RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 DGAT2L7PQ6IED9 249 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 INO80CQ6PI98 192 aaPredicted RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 IL27RAQ6UWB1 636 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 Q6ZUG5 572 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 LARP4Q71RC2 724 aaKnown RBP eCLIP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 SCML4Q8N228 414 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 MB21D1Q8N884 522 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 USP38Q8NB14 1042 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 CTCFLQ8NI51 663 aaPredicted RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 FEZF2Q8TBJ5 459 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 AFAP1L1Q8TED9 768 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 GRAMD1AQ96CP6 724 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 ZNF274Q96GC6 653 aaPredicted RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 LZTS2Q9BRK4 669 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 MRI1Q9BV20 369 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 UPF3BQ9BZI7 483 aaKnown RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 MUC13Q9H3R2 512 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 ZBTB26Q9HCK0 441 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 PDE7BQ9NP56 450 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 DECR2Q9NUI1 292 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 RBM28Q9NW13 759 aaKnown RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 VPS51Q9UID3 782 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 CORO1CQ9ULV4 474 aaPredicted RBP4.81□□□□□ -1.64
CFHR3-205ENST00000471440 CDY1Q9Y6F8 540 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 PHIPQ8WWQ0 1821 aa4.81□□□□□ -1.64
CFHR3-205ENST00000471440 ZBTB43O43298 467 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CCP110O43303 1012 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TLR2O60603 784 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 FLOT1O75955 427 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TOX4O94842 621 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 KIR2DL3P43628 341 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 FAM3BP58499 235 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms