RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ADGRA2Q96PE1 1338 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 A0A096LPK6 155 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 CLRN2A0PK11 232 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 ZNF839A8K0R7 811 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 H0YCG3 227 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 GRID2O43424 1007 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 AKAP10O43572 662 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 RAD17O75943 681 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 TFEBP19484 476 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 SAT1P21673 171 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 RAB39AQ14964 217 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 ARHGEF16Q5VV41 709 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 LAYNQ6UX15 382 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 CDAN1Q8IWY9 1227 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 SLC15A4Q8N697 577 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 ARNTL2Q8WYA1 636 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 MCRS1Q96EZ8 462 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 SNRNP25Q9BV90 132 aaKnown RBP13.99□□□□□ -0.17
NPHP4-207ENST00000470763 LHX5Q9H2C1 402 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 CDYLQ9Y232 598 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 FIS1Q9Y3D6 152 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 MFHAS1Q9Y4C4 1052 aa13.99□□□□□ -0.17
NPHP4-207ENST00000470763 KPNA7A9QM74 516 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 MICAL2O94851 1124 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 GRM5P41594 1212 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 GLRBP48167 497 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 RHDQ02161 417 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 TRAF2Q12933 501 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 ITGADQ13349 1161 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 NEDD8Q15843 81 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 DNAJC14Q6Y2X3 702 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-207ENST00000470763 WDR49Q8IV35 697 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 BRSK2Q8IWQ3 736 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 DCPSQ96C86 337 aaKnown RBP13.98□□□□□ -0.17
NPHP4-207ENST00000470763 POLR1BQ9H9Y6 1135 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 TRPC7Q9HCX4 862 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 CDH7Q9ULB5 785 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 PCDHGA7Q9Y5G6 932 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 FAM149AA5PLN7 773 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 NRP1O14786 923 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 MED7O43513 233 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 INHBBP09529 407 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 GP5P40197 560 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 GRIA4P48058 902 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 GLRA4Q5JXX5 417 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 CDKL3Q8IVW4 592 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-207ENST00000470763 OFCC1Q8IZS5 231 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 ACVR1CQ8NER5 493 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 TFAP2CQ92754 450 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 AGAP2Q99490 1192 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 NMRAL1Q9HBL8 299 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 TMED5Q9Y3A6 229 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 KIAA1217Q5T5P2 1943 aa13.98□□□□□ -0.17
NPHP4-207ENST00000470763 C2CD4BA6NLJ0 364 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 TMEM114B3SHH9 223 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 H0YJX3 145 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 TPST1O60507 370 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 C8BP07358 591 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 CYP2F1P24903 491 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 GARSP41250 739 aaKnown RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 RGS7P49802 495 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 NAGLUP54802 743 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 DUOXA2Q1HG44 320 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 PITRM1Q5JRX3 1037 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 HEATR6Q6AI08 1181 aaKnown RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 FSTL4Q6MZW2 842 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 STRA8Q7Z7C7 330 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 MCF2L2Q86YR7 1114 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 ZNF385DQ9H6B1 395 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 KIAA1522Q9P206 1035 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 RAP2CQ9Y3L5 183 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 PRORSD1PA6NEY8 169 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 TADA2AO75478 443 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 GCATO75600 419 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 OXSR1O95747 527 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 NFKBIAP25963 317 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 YAP1P46937 504 aaKnown RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 PRKCQQ04759 706 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 SEMA5AQ13591 1074 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 PDK2Q15119 407 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 ANKRD26P1Q6NSI1 321 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 NIPAL1Q6NVV3 410 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 FAM183BPQ6ZVS7 135 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 ZC3H7AQ8IWR0 971 aaKnown RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 CBR4Q8N4T8 237 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 CHPT1Q8WUD6 406 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 SREK1Q8WXA9 508 aaKnown RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 CASP10Q92851 521 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 UNKQ9C0B0 810 aaKnown RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 XYLT2Q9H1B5 865 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 DEFB129Q9H1M3 183 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 PXMP2Q9NR77 195 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 C1orf232A0A0U1RR37 186 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 PGAM1P18669 254 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 LRRC8EQ6NSJ5 796 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 SLC2A7Q6PXP3 512 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 CDR2LQ86X02 465 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-207ENST00000470763 SLC7A5P1Q8MH63 180 aa13.97□□□□□ -0.17
NPHP4-207ENST00000470763 SCN9AQ15858 1988 aa13.96□□□□□ -0.17
NPHP4-207ENST00000470763 ATXN1P54253 815 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms