RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 TTC31Q49AM3 519 aaPredicted RBP23.8■■□□□ 1.4
SUMO3-205ENST00000466861 ACCSLQ4AC99 568 aa23.8■■□□□ 1.4
SUMO3-205ENST00000466861 INO80DQ53TQ3 878 aaPredicted RBP23.8■■□□□ 1.4
SUMO3-205ENST00000466861 PRR23BQ6ZRT6 265 aa23.8■■□□□ 1.4
SUMO3-205ENST00000466861 USP30Q70CQ3 517 aa23.8■■□□□ 1.4
SUMO3-205ENST00000466861 PCDH20Q8N6Y1 951 aaKnown RBP23.8■■□□□ 1.4
SUMO3-205ENST00000466861 OR8D1Q8WZ84 308 aa23.8■■□□□ 1.4
SUMO3-205ENST00000466861 CSPG4P5Q96PW8 444 aa23.8■■□□□ 1.4
SUMO3-205ENST00000466861 FAM129BQ96TA1 746 aa23.8■■□□□ 1.4
SUMO3-205ENST00000466861 ZNF670Q9BS34 389 aa23.8■■□□□ 1.4
SUMO3-205ENST00000466861 KLC2Q9H0B6 622 aa23.8■■□□□ 1.4
SUMO3-205ENST00000466861 DUSP15Q9H1R2 295 aaPredicted RBP23.8■■□□□ 1.4
SUMO3-205ENST00000466861 GPR179Q6PRD1 2367 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 MCF2LO15068 1137 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 DCLK1O15075 740 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 ADH1BP00325 375 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 MT-CO1P00395 513 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 RETP07949 1114 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 NOP2P46087 812 aaKnown RBP23.79■■□□□ 1.4
SUMO3-205ENST00000466861 VAV2P52735 878 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 PMS2CLQ68D20 193 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 C22orf39Q6P5X5 142 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 ASCL5Q7RTU5 278 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 RUBCNQ92622 972 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 PCED1AQ9H1Q7 454 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 GMEB2Q9UKD1 530 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 PCDHGA5Q9Y5G8 931 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 SDK1Q7Z5N4 2213 aa23.79■■□□□ 1.4
SUMO3-205ENST00000466861 CEP192Q8TEP8 1941 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 TMEM110-MUSTN1A8MSY1 372 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 GFRA3O60609 400 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 GLDCP23378 1020 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 CD6P30203 668 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 SERPINB6P35237 376 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 DPP6P42658 865 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 TPMTP51580 245 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 TAS2R40P59535 323 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 CST6Q15828 149 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 FAM46CQ5VWP2 391 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 C11orf63Q6NUN7 778 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 TMCO3Q6UWJ1 677 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 LPCAT2Q7L5N7 544 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 KBTBD6Q86V97 674 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 FAM160A2Q8N612 972 aaPredicted RBP23.78■■□□□ 1.4
SUMO3-205ENST00000466861 KCTD6Q8NC69 237 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 RLN3Q8WXF3 142 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 HMCESQ96FZ2 354 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 SLC6A17Q9H1V8 727 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 MTG2Q9H4K7 406 aa23.78■■□□□ 1.4
SUMO3-205ENST00000466861 REXO2Q9Y3B8 237 aaKnown RBP23.78■■□□□ 1.4
SUMO3-205ENST00000466861 MAP3K13O43283 966 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 LRP3O75074 770 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 CD160O95971 181 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 C5AR1P21730 350 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 RECQLP46063 649 aaPredicted RBP23.77■■□□□ 1.4
SUMO3-205ENST00000466861 MRE11P49959 708 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 LINGO4Q6UY18 593 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 LRRC49Q8IUZ0 686 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 RHOT1Q8IXI2 618 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 STK40Q8N2I9 435 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 FAF2Q96CS3 445 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 PABPC3Q9H361 631 aaKnown RBP23.77■■□□□ 1.4
SUMO3-205ENST00000466861 DDX56Q9NY93 547 aaKnown RBP23.77■■□□□ 1.4
SUMO3-205ENST00000466861 WSB2Q9NYS7 404 aaPredicted RBP23.77■■□□□ 1.4
SUMO3-205ENST00000466861 MBD1Q9UIS9 605 aaPredicted RBP23.77■■□□□ 1.4
SUMO3-205ENST00000466861 NCKAP1Q9Y2A7 1128 aa23.77■■□□□ 1.4
SUMO3-205ENST00000466861 RALGAPA1Q6GYQ0 2036 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 SMAD6O43541 496 aaKnown RBP23.76■■□□□ 1.39
SUMO3-205ENST00000466861 BUB1BO60566 1050 aaPredicted RBP23.76■■□□□ 1.39
SUMO3-205ENST00000466861 IL4RP24394 825 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 DPYSL3Q14195 570 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 Q6ZVU0 165 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 ARHGAP12Q8IWW6 846 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 GPR161Q8N6U8 529 aaKnown RBP23.76■■□□□ 1.39
SUMO3-205ENST00000466861 OR2A12Q8NGT7 310 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 SLC39A8Q9C0K1 460 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 SGK2Q9HBY8 427 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 PPM1HQ9ULR3 514 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 FZD4Q9ULV1 537 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 CYP8B1Q9UNU6 501 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 ALG6Q9Y672 507 aa23.76■■□□□ 1.39
SUMO3-205ENST00000466861 PTPRZ1P23471 2315 aaPredicted RBP23.76■■□□□ 1.39
SUMO3-205ENST00000466861 C1QTNF3-AMACRE9PGA6 284 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 K7ERQ8 282 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 ARHGAP6O43182 974 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 PSTPIP1O43586 416 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 BUB1O43683 1085 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 PRAMEF11O60813 436 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 EPN2O95208 641 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 PRNPP04156 253 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 VAV1P15498 845 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 BCKDHBP21953 392 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 COMTP21964 271 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 AMPD1P23109 780 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 SLC8A1P32418 973 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 NUMBP49757 651 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 IFI16Q16666 785 aaKnown RBP23.75■■□□□ 1.39
SUMO3-205ENST00000466861 ATP13A4Q4VNC1 1196 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 TMCO4Q5TGY1 634 aa23.75■■□□□ 1.39
SUMO3-205ENST00000466861 KIAA1328Q86T90 577 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms