RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ELAVL3Q14576 367 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 RFTN1Q14699 578 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 GRM3Q14832 879 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 PAFAH1B3Q15102 231 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 PDK1Q15118 436 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 DLG2Q15700 870 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 PPP2R5EQ16537 467 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ZNF528Q3MIS6 628 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ATP13A4Q4VNC1 1196 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 INO80DQ53TQ3 878 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 CFAP58Q5T655 872 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 FAM46CQ5VWP2 391 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 KAZNQ674X7 775 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 TMEM215Q68D42 235 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ZNF776Q68DI1 518 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 TXNRD3NBQ6F5E7 133 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ANO7Q6IWH7 933 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 C22orf39Q6P5X5 142 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 KIAA1324Q6UXG2 1013 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SPOCD1Q6ZMY3 1216 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 NT5DC3Q86UY8 548 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 KBTBD6Q86V97 674 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 LONP2Q86WA8 852 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ZNF687Q8N1G0 1237 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SH2D3CQ8N5H7 860 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 LRRC57Q8N9N7 239 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 TTC13Q8NBP0 860 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 CCNYQ8ND76 341 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 OR2T3Q8NH03 318 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 GANCQ8TET4 914 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 HMGB4Q8WW32 186 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 MAIP1Q8WWC4 291 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SORCS1Q8WY21 1168 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 RAPGEF5Q92565 580 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 TSC1Q92574 1164 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 P3H4Q92791 437 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 EZH1Q92800 747 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ISG20Q96AZ6 181 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 FAF2Q96CS3 445 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ALG14Q96F25 216 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SIPA1Q96FS4 1042 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 HMCESQ96FZ2 354 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 PPP1R16AQ96I34 528 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 CELF6Q96J87 481 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 GDAP1L1Q96MZ0 367 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ZNF599Q96NL3 588 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 HHIPQ96QV1 700 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 CINPQ9BW66 212 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ACE2Q9BYF1 805 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 MAGEB5Q9BZ81 275 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SLC39A8Q9C0K1 460 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 BRD8Q9H0E9 1235 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 TMEM245Q9H330 911 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 PRMT8Q9NR22 394 aaPredicted RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ZSCAN32Q9NX65 697 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 ZNF212Q9UDV6 495 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 TRIM10Q9UDY6 481 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 IPO11Q9UI26 975 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 SALL4Q9UJQ4 1053 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 INTS6Q9UL03 887 aaKnown RBP6.51□□□□□ -1.37
SF3B1-206ENST00000462613 RAB23Q9ULC3 237 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 NCKAP1Q9Y2A7 1128 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 EFR3BQ9Y2G0 817 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 HEY1Q9Y5J3 304 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 CAPN6Q9Y6Q1 641 aa6.51□□□□□ -1.37
SF3B1-206ENST00000462613 PI4KAP42356 2102 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 WASH3PC4AMC7 463 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 MCF2LO15068 1137 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 MAP3K13O43283 966 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 MTSS1O43312 755 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 CST8O60676 142 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 PRAMEF11O60813 436 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 NDUFS2O75306 463 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 STK10O94804 968 aaKnown RBP6.5□□□□□ -1.37
SF3B1-206ENST00000462613 ADH1BP00325 375 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 GSRP00390 522 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 IL1BP01584 269 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 CD48P09326 243 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 SRCP12931 536 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 HLA-EP13747 358 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 CA4P22748 312 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 PRKCHP24723 683 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 CCNCP24863 283 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 ACTN2P35609 894 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 GARSP41250 739 aaKnown RBP6.5□□□□□ -1.37
SF3B1-206ENST00000462613 CDKN2BP42772 138 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 CTSOP43234 321 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-206ENST00000462613 TNNT3P45378 269 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-206ENST00000462613 MAPK8P45983 427 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 NUMBP49757 651 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 STK19P49842 368 aaPredicted RBP6.5□□□□□ -1.37
SF3B1-206ENST00000462613 PAPOLAP51003 745 aaKnown RBP6.5□□□□□ -1.37
SF3B1-206ENST00000462613 ARSEP51690 589 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 RHOAP61586 193 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 DYNLT1P63172 113 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 ARF5P84085 180 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 ZBTB16Q05516 673 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 ZNF33AQ06730 810 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 MESP2Q0VG99 397 aa6.5□□□□□ -1.37
SF3B1-206ENST00000462613 ENPP2Q13822 863 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms