RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 XKR3Q5GH77 459 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 TDRD10Q5VZ19 366 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 GTF2IRD2BQ6EKJ0 949 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 GTF2IRD2Q86UP8 949 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 TDRD5Q8NAT2 981 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 VWCEQ96DN2 955 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 HEPHQ9BQS7 1158 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 FGFBP2Q9BYJ0 223 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 RRAGCQ9HB90 399 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 IL20Q9NYY1 176 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 KANSL3Q9P2N6 904 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 WRAP73Q9P2S5 460 aaPredicted RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 AMACRQ9UHK6 382 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 BZW2Q9Y6E2 419 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 ZHX2Q9Y6X8 837 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 A0A1W2PQ09 198 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 SOCS6O14544 535 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 N4BP1O75113 896 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 XYLBO75191 536 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 NIPSNAP2O75323 286 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 LRRN2O75325 713 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 DAB1O75553 588 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 DIRAS3O95661 229 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 PIGRP01833 764 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 NR3C1P04150 777 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 NR3C2P08235 984 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 DLATP10515 647 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 NR2F1P10589 423 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 AFF1P51825 1210 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 JAM2P57087 298 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 SLC8A3P57103 927 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 FKBP1BP68106 108 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 SRSF2Q01130 221 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 FOXK2Q01167 660 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 KRT17Q04695 432 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 TRA2AQ13595 282 aaKnown RBP eCLIP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 MPP2Q14168 576 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 ZNF124Q15973 351 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 RNFT1Q5M7Z0 435 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 PDPK2PQ6A1A2 396 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 SEZ6L2Q6UXD5 910 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 PSTKQ8IV42 348 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 TAGAPQ8N103 731 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 GLB1L3Q8NCI6 653 aaPredicted RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 FER1L6-AS2Q96M78 137 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 MRPL44Q9H9J2 332 aaKnown RBP7.98□□□□□ -1.13
BRCC3-208ENST00000453705 ERVK-19Q9WJR5 959 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 ANK1P16157 1881 aa7.98□□□□□ -1.13
BRCC3-208ENST00000453705 ARHGEF35A5YM69 484 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 TTC34A8MYJ7 566 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 KIAA0355O15063 1070 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CNMDO75829 334 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 ALBP02768 609 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CFHP08603 1231 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 POTEJP0CG39 1038 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 MYF5P13349 255 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 GP5P40197 560 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 KPNA1P52294 538 aaPredicted RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 VAV2P52735 878 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 EIF3EP60228 445 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 SUMO1P63165 101 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 UBE3AQ05086 875 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 ADAM9Q13443 819 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 RIPK1Q13546 671 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 KCNC3Q14003 757 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 COTL1Q14019 142 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 VGLL4Q14135 290 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 OR7E24Q6IFN5 339 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 PAPD4Q6PIY7 484 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CRELD2Q6UXH1 353 aaPredicted RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 H1FNTQ75WM6 255 aaPredicted RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 C16orf59Q7L2K0 433 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CPLX4Q7Z7G2 160 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CNTN4Q8IWV2 1026 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CCDC155Q8N6L0 562 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 C19orf47Q8N9M1 422 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 IFI44Q8TCB0 444 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CDKL2Q92772 493 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 KIFAP3Q92845 792 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 RNF125Q96EQ8 232 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 PDLIM5Q96HC4 596 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 NUDCD1Q96RS6 583 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 LBHD1Q9BQE6 289 aaPredicted RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 STK33Q9BYT3 514 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 FRMD8P1Q9BZ68 369 aaPredicted RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 ATAD3AQ9NVI7 634 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 RGL1Q9NZL6 768 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 KLHL20Q9Y2M5 609 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 GPSM3Q9Y4H4 160 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 CORINQ9Y5Q5 1042 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 C15orf38-AP3S2A0A0A6YYH1 394 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 FANCGO15287 622 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 HNRNPRO43390 633 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 SERPING1P05155 500 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 EPB41P11171 864 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 PCSK2P16519 638 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 TAL1P17542 331 aaPredicted RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 PSMC2P35998 433 aaKnown RBP7.97□□□□□ -1.13
BRCC3-208ENST00000453705 WNT5AP41221 380 aa7.97□□□□□ -1.13
BRCC3-208ENST00000453705 PTGIRP43119 386 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms