RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 NME3Q13232 169 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 TAF5Q15542 800 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 ZNF284Q2VY69 593 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 PIP5KL1Q5T9C9 394 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 OR6B2Q6IFH4 312 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 NEK5Q6P3R8 708 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 Q6ZSR6 202 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 DEFB106AQ8N104 65 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 OR52K2Q8NGK3 314 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 ALG14Q96F25 216 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 SCAND2PQ9GZW5 306 aaPredicted RBP18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 SIK2Q9H0K1 926 aa18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 IPO11Q9UI26 975 aaKnown RBP18.48■□□□□ 0.55
CHCHD3-203ENST00000448878 ARID1BQ8NFD5 2236 aaPredicted RBP18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 K7ESM1 405 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 SCAMP1O15126 338 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 THAP12O43422 761 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 DXOO77932 396 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 IGLV3-25P01717 112 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 GP1BAP07359 652 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 CTSLP07711 333 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 GIMD1P0DJR0 217 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 KRT10P13645 584 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 C6P13671 934 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 RPL34P49207 117 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 IRAK1P51617 712 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 HNRNPKP61978 463 aaKnown RBP eCLIP18.47■□□□□ 0.556e-7■■□□□ 13
CHCHD3-203ENST00000448878 AUHQ13825 339 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 CDKN3Q16667 212 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 ISM2Q6H9L7 571 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 ARRDC3Q96B67 414 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 SLC4A5Q9BY07 1137 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 GTPBP4Q9BZE4 634 aaKnown RBP18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 CLMPQ9H6B4 373 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 GDPD2Q9HCC8 539 aa18.47■□□□□ 0.55
CHCHD3-203ENST00000448878 A6NNZ2 444 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 GRAP2O75791 330 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 ENDOD1O94919 500 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 SMC2O95347 1197 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 MT-CO1P00395 513 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 SRCP12931 536 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 TGM2P21980 687 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 VASPP50552 380 aaPredicted RBP18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 GCNT1Q02742 428 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 KCNC4Q03721 635 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 STIM1Q13586 685 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 ISXQ2M1V0 245 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 ARSIQ5FYB1 569 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 KIAA1614Q5VZ46 1190 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 SEL1L3Q68CR1 1132 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 CRTC1Q6UUV9 634 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 GCNT7Q6ZNI0 430 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 EHBP1Q8NDI1 1231 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 GRIN3AQ8TCU5 1115 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 STK32AQ8WU08 396 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 ZNF606Q8WXB4 792 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 SMARCE1Q969G3 411 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 GSDMAQ96QA5 445 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 ASCL3Q9NQ33 180 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 ZFR2Q9UPR6 939 aaKnown RBP18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 MGAQ8IWI9 3026 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 TENM4Q6N022 2769 aa18.46■□□□□ 0.55
CHCHD3-203ENST00000448878 K7ERQ8 282 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 PSMA7O14818 248 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 SLC28A2O43868 658 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 SNAP91O60641 907 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 CLDN11O75508 207 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 PAK4O96013 591 aaPredicted RBP18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 PRNPP04156 253 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 RHOCP08134 193 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 RRM1P23921 792 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 RECQLP46063 649 aaPredicted RBP18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 ERN2Q76MJ5 926 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 EFL1Q7Z2Z2 1120 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 TMEM110Q86TL2 294 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 DCP2Q8IU60 420 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 SLC22A18ASQ8N1D0 253 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 TMIEQ8NEW7 156 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 OR2A12Q8NGT7 310 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 LMO3Q8TAP4 145 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 CCDC97Q96F63 343 aaPredicted RBP18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 ATXN7L3BQ96GX2 97 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 KREMEN1Q96MU8 473 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 TNKS2Q9H2K2 1166 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 SYNDIG1Q9H7V2 258 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 USP29Q9HBJ7 922 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 UBE2TQ9NPD8 197 aaPredicted RBP18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 HS3ST4Q9Y661 456 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 ZNF462Q96JM2 2506 aa18.45■□□□□ 0.54
CHCHD3-203ENST00000448878 H3BM21 787 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 P4HA2O15460 535 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 GNA15P30679 374 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 USP8P40818 1118 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 CDH4P55283 916 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 ZSCAN23Q3MJ62 389 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 COBLL1Q53SF7 1204 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 EFHC1Q5JVL4 640 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 KLHL10Q6JEL2 608 aa18.44■□□□□ 0.54
CHCHD3-203ENST00000448878 ZCCHC8Q6NZY4 707 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms