RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 FAM107BQ9H098 131 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 ERVK-5Q9HDB9 667 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 THAP1Q9NVV9 213 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 KLQ9UEF7 1012 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 TBX20Q9UMR3 447 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 ARHGEF17Q96PE2 2063 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 WDR7Q9Y4E6 1490 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 C9orf84Q5VXU9 1444 aa4.8□□□□□ -1.64
HMGB1P16-201ENST00000447155 TOPBP1Q92547 1522 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 ERICH4A6NGS2 130 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 DSCR3O14972 297 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 DHX16O60231 1041 aaKnown RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 METTL18O95568 372 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 IGHDP01880 384 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 IVLP07476 585 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 TACR3P29371 465 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 KRT9P35527 623 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 PGM1P36871 562 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 RPS6KA3P51812 740 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 ADPRHP54922 357 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 TGFB2P61812 414 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 MPP1Q00013 466 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 NCBP1Q09161 790 aaKnown RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 LMOD3Q0VAK6 560 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 MAPRE1Q15691 268 aaKnown RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZRSR1Q15695 479 aaKnown RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 PROSER3Q2NL68 480 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 HSP90AB3PQ58FF7 597 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 AWAT1Q58HT5 328 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 CCDC183Q5T5S1 534 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZKSCAN2Q63HK3 967 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 FCRLBQ6BAA4 426 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 LRRC8DQ7L1W4 858 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 ARHGEF25Q86VW2 580 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 UEVLDQ8IX04 471 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 EXD3Q8N9H8 876 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 PNLDC1Q8NA58 520 aaKnown RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 PCYOX1LQ8NBM8 494 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 PPHLN1Q8NEY8 458 aaKnown RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 KIF18AQ8NI77 898 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 KCNJ9Q92806 393 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 SH3KBP1Q96B97 665 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 TRIM31Q9BZY9 425 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 OSBPL5Q9H0X9 879 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 TAOK3Q9H2K8 898 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZHX3Q9H4I2 956 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 STN1Q9H668 368 aaKnown RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 SMC4Q9NTJ3 1288 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 CTNNA3Q9UI47 895 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 CD207Q9UJ71 328 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 A2MP01023 1474 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 TROQ12816 1431 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 TUBGCP6Q96RT7 1819 aa4.79□□□□□ -1.64
HMGB1P16-201ENST00000447155 POLR3AO14802 1390 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 DISP3Q9P2K9 1392 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 ELP1O95163 1332 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 MYH15Q9Y2K3 1946 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 QRICH2Q9H0J4 1663 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 PLA2R1Q13018 1463 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 FANCD2Q9BXW9 1451 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 A0A1B0GUL7 405 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 MCIDASD6RGH6 385 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 NEMFO60524 1076 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 CCNT1O60563 726 aaKnown RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 GUCY1B2O75343 617 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 C1QL1O75973 258 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 RNF8O76064 485 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 FSHBP01225 129 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 IGLV2-14P01704 120 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 TUBB4AP04350 444 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 WEE2P0C1S8 567 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 NHLRC4P0CG21 123 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 CYP2A6P11509 494 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 LYL1P12980 280 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 CYP4B1P13584 511 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 AKR1A1P14550 325 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 PKMP14618 531 aaKnown RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 HOXB9P17482 250 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 MCCP23508 829 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 AVPR2P30518 371 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 CASQ1P31415 396 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 CLK3P49761 638 aaKnown RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 MVDP53602 400 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 OAZ1P54368 228 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 NR1H2P55055 460 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 SETQ01105 290 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 COL10A1Q03692 680 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 ANXA2RQ3ZCQ2 193 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 TTC31Q49AM3 519 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 GXYLT1Q4G148 440 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 PRAMEF17Q5VTA0 474 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZNF474Q6S9Z5 364 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 DHRS13Q6UX07 377 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 MAATS1Q7Z4T9 603 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 GALNT7Q86SF2 657 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 RHPN2Q8IUC4 686 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 SCN4BQ8IWT1 228 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 TCP11L2Q8N4U5 519 aa4.78□□□□□ -1.64
HMGB1P16-201ENST00000447155 ZNF398Q8TD17 642 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms