RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 FSTL1Q12841 308 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 SEMA5AQ13591 1074 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 CAPSQ13938 189 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 RAB39AQ14964 217 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 DGKDQ16760 1214 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 LDLRAP1Q5SW96 308 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 STRIP1Q5VSL9 837 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 ILDR2Q71H61 639 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 SPATA6LQ8N4H0 392 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 CBR4Q8N4T8 237 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 SLC15A4Q8N697 577 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 CCNYL1Q8N7R7 359 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 TANKQ92844 425 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 ZNF669Q96BR6 464 aaPredicted RBP14.19□□□□□ -0.14
VPS52-212ENST00000445902 FBXL20Q96IG2 436 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 SCYL1Q96KG9 808 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 POLR1BQ9H9Y6 1135 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 AURKCQ9UQB9 309 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 RAP2CQ9Y3L5 183 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 TANC1Q9C0D5 1861 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 C2P06681 752 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 NR3C2P08235 984 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 NAMPTP43490 491 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 RHDQ02161 417 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 PRKCQQ04759 706 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 PDK2Q15119 407 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 KIZQ2M2Z5 673 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 MAP7D1Q3KQU3 841 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 MAMDC4Q6UXC1 1216 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 CYGBQ8WWM9 190 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 SREK1Q8WXA9 508 aaKnown RBP14.19□□□□□ -0.14
VPS52-212ENST00000445902 DEFB129Q9H1M3 183 aa14.19□□□□□ -0.14
VPS52-212ENST00000445902 CTDP1Q9Y5B0 961 aaPredicted RBP14.19□□□□□ -0.14
VPS52-212ENST00000445902 BPTFQ12830 3046 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 TMEM114B3SHH9 223 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 PHGDHO43175 533 aaKnown RBP14.18□□□□□ -0.14
VPS52-212ENST00000445902 PAPSS1O43252 624 aaPredicted RBP14.18□□□□□ -0.14
VPS52-212ENST00000445902 RGS20O76081 388 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 PSMB4P28070 264 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 EN1Q05925 392 aaPredicted RBP14.18□□□□□ -0.14
VPS52-212ENST00000445902 ZNF667Q5HYK9 610 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 OLFML1Q6UWY5 402 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 WNK4Q96J92 1243 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 ACE2Q9BYF1 805 aaPredicted RBP14.18□□□□□ -0.14
VPS52-212ENST00000445902 TMEM39BQ9GZU3 492 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 MUC3BQ9H195 1237 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 SOX17Q9H6I2 414 aaPredicted RBP14.18□□□□□ -0.14
VPS52-212ENST00000445902 TRPC7Q9HCX4 862 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 PPP1R1BQ9UD71 204 aaPredicted RBP14.18□□□□□ -0.14
VPS52-212ENST00000445902 RIPK3Q9Y572 518 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 C1orf232A0A0U1RR37 186 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 ZNF12P17014 697 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 DCLRE1AQ6PJP8 1040 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 ZC3H7AQ8IWR0 971 aaKnown RBP14.18□□□□□ -0.14
VPS52-212ENST00000445902 TMEM192Q8IY95 271 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 URGCPQ8TCY9 931 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 CANT1Q8WVQ1 401 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 TFAP2CQ92754 450 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 RBBP8Q99708 897 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 ZNF385DQ9H6B1 395 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 OXSMQ9NWU1 459 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 CCDC167Q9P0B6 97 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 SPATA7Q9P0W8 599 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 SLC39A10Q9ULF5 831 aa14.18□□□□□ -0.14
VPS52-212ENST00000445902 MT-CO1P00395 513 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 PIGRP01833 764 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 C8BP07358 591 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 HOXC6P09630 235 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 GRIA3P42263 894 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 CBLBQ13191 982 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 XKR3Q5GH77 459 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 RWDD4Q6NW29 188 aaKnown RBP14.17□□□□□ -0.14
VPS52-212ENST00000445902 SCUBE3Q8IX30 993 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 SLC7A5P1Q8MH63 180 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 C12orf29Q8N999 325 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 TRPC4APQ8TEL6 797 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 HTR3CQ8WXA8 447 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 OMDQ99983 421 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 VPS33BQ9H267 617 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 SYNPO2Q9UMS6 1093 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 FADS3Q9Y5Q0 445 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 TADA2AO75478 443 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 KCNH1O95259 989 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 TNNC2P02585 160 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 POLBP06746 335 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 SOX11P35716 441 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 TMEM132AQ24JP5 1023 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 BOLA3Q53S33 107 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 ANKRD26P1Q6NSI1 321 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 GALNT18Q6P9A2 607 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 PYROXD2Q8N2H3 581 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 OR52K1Q8NGK4 314 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 SGF29Q96ES7 293 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 B3GNT5Q9BYG0 378 aa14.17□□□□□ -0.14
VPS52-212ENST00000445902 HEATR9A2RTY3 570 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
VPS52-212ENST00000445902 CYP3A5P20815 502 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 ACADVLP49748 655 aa14.16□□□□□ -0.14
VPS52-212ENST00000445902 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.16□□□□□ -0.14
VPS52-212ENST00000445902 CPSF7Q8N684 471 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 199.4 ms