RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 LRCH4O75427 683 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 CST3P01034 146 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 AUHQ13825 339 aaKnown RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 OTOAQ7RTW8 1153 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 PTAR1Q7Z6K3 402 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 FBXO39Q8N4B4 442 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 CASP10Q92851 521 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 SELENONQ9NZV5 590 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 WRAP73Q9P2S5 460 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 DICER1Q9UPY3 1922 aaKnown RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 GJB1P08034 283 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 OR9Q1Q8NGQ5 310 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 HAPLN3Q96S86 360 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 BTBD10Q9BSF8 475 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 CNTN3Q9P232 1028 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 HAO1Q9UJM8 370 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 STYXL1Q9Y6J8 313 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 ANKRD65E5RJM6 399 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 GPR25O00155 361 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 CDC25CP30307 473 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 TERB1Q8NA31 727 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 SERAC1Q96JX3 654 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 ARID2Q68CP9 1835 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 CA12O43570 354 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 TGM3Q08188 693 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 GJC2Q5T442 439 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 SIAH1Q8IUQ4 282 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 SH3GL2Q99962 352 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 CORO1CQ9ULV4 474 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 MLYCDO95822 493 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 RCN1Q15293 331 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 SSU72Q9NP77 194 aaKnown RBP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTCH1-208ENST00000430669 RBPJLQ9UBG7 517 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 DYRK1BQ9Y463 629 aa11.72□□□□□ -0.53
PTCH1-208ENST00000430669 SCN4AP35499 1836 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 DYNC1I2Q13409 638 aaKnown RBP11.71□□□□□ -0.53
PTCH1-208ENST00000430669 NKAPQ8N5F7 415 aaKnown RBP11.71□□□□□ -0.53
PTCH1-208ENST00000430669 CCDC33Q8N5R6 958 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 PPP1R10Q96QC0 940 aaKnown RBP11.71□□□□□ -0.53
PTCH1-208ENST00000430669 TMEM109Q9BVC6 243 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 KRCC1Q9NPI7 259 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-208ENST00000430669 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF180Q9UJW8 692 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 E2F8A0AVK6 867 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 IL2P60568 153 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 APOL2Q9BQE5 337 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 OSBPL1AQ9BXW6 950 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 SHBGP04278 402 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 HLA-DPA1P20036 260 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 CD86P42081 329 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 FAAP100Q0VG06 881 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 CSHL1Q14406 222 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 WLSQ5T9L3 541 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 TDRPQ86YL5 185 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 RBM47A0AV96 593 aaKnown RBP11.71□□□□□ -0.53
PTCH1-208ENST00000430669 FSBPO95073 299 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 TYMPP19971 482 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 CAMK2GQ13555 558 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF792Q3KQV3 632 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 NPNTQ6UXI9 565 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 HEXDCQ8WVB3 486 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 SPACA6W5XKT8 324 aa11.71□□□□□ -0.53
PTCH1-208ENST00000430669 VAPBO95292 243 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 KRT6AP02538 564 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 KRT6BP04259 564 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 GLRBP48167 497 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 KRT6CP48668 564 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 HORMAD1Q86X24 394 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 TAGAPQ8N103 731 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 MIER2Q8N344 545 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 FUBP3Q96I24 572 aaKnown RBP eCLIP11.71□□□□□ -0.54
PTCH1-208ENST00000430669 BCO2Q9BYV7 579 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 FNIP2Q9P278 1114 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 TBC1D30Q9Y2I9 924 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 PTPRJQ12913 1337 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 DYTNA2CJ06 578 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 UBDO15205 165 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 ERVK-10P10266 1014 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 DGKAP23743 735 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 RAB10P61026 200 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 SLC10A6Q3KNW5 377 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 ZC3H12AQ5D1E8 599 aaKnown RBP11.71□□□□□ -0.54
PTCH1-208ENST00000430669 TXNDC11Q6PKC3 985 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 STAG3L4Q8TBR4 150 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 LPPQ93052 612 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 SAE1Q9UBE0 346 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-208ENST00000430669 HBS1LQ9Y450 684 aaKnown RBP11.71□□□□□ -0.54
PTCH1-208ENST00000430669 IRS2Q9Y4H2 1338 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 FAM95CA0A1B0GW59 222 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 IFRD1O00458 451 aaPredicted RBP11.71□□□□□ -0.54
PTCH1-208ENST00000430669 UBOX5O94941 541 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 PCSK2P16519 638 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 OVGP1Q12889 678 aa11.71□□□□□ -0.54
PTCH1-208ENST00000430669 EIF2B5Q13144 721 aaKnown RBP11.71□□□□□ -0.54
PTCH1-208ENST00000430669 FRG1Q14331 258 aaKnown RBP11.71□□□□□ -0.54
PTCH1-208ENST00000430669 LIPMQ5VYY2 423 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms