RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 TATDN2Q93075 761 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 COPS4Q9BT78 406 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 ASAH2Q9NR71 780 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 PSMD13Q9UNM6 376 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 PKNOX1P55347 436 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 TRAF3Q13114 568 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 CCNG2Q16589 344 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 C16orf86Q6ZW13 317 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 HIPK1Q86Z02 1210 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 FBXO44Q9H4M3 255 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 BTRCQ9Y297 605 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 NLRP1Q9C000 1473 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 RASA1P20936 1047 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 CD151P48509 253 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 RUBCNQ92622 972 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 REPS1Q96D71 796 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 ERP44Q9BS26 406 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 PIK3CDO00329 1044 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 PHGDHO43175 533 aaKnown RBP18.72■□□□□ 0.59
SHANK3-202ENST00000414786 RENBPP51606 427 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 ING5Q8WYH8 240 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 SGSM3Q96HU1 749 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 MAGEB3O15480 346 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 MED24O75448 989 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 LRRC6Q86X45 466 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 ERO1BQ86YB8 467 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 PHF20Q9BVI0 1012 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 CDHR5Q9HBB8 845 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 MAPKBP1O60336 1514 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 GAKO14976 1311 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 RBP1P09455 135 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 VHLP40337 213 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 PCDH1Q08174 1060 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 AMZ1Q400G9 498 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 PITRM1Q5JRX3 1037 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 KCT2Q8NC54 265 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 MTMR8Q96EF0 704 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 GAD1Q99259 594 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 EPB41L1Q9H4G0 881 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 CATSPERZQ9NTU4 200 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF208O43345 1280 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 ICAM1P05362 532 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 SRGNP10124 158 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 CYP4B1P13584 511 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 VEGFAP15692 232 aaPredicted RBP18.72■□□□□ 0.59
SHANK3-202ENST00000414786 VPS35Q96QK1 796 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 KANSL3Q9P2N6 904 aa18.72■□□□□ 0.59
SHANK3-202ENST00000414786 CXCL14O95715 111 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 XKR6Q5GH73 641 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 EIF3MQ7L2H7 374 aaKnown RBP18.71■□□□□ 0.59
SHANK3-202ENST00000414786 LPCAT2Q7L5N7 544 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 ALG9Q9H6U8 611 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 AP4S1Q9Y587 144 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 KCNA5P22460 613 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 RGS1Q08116 209 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 C7orf61Q8IZ16 206 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 TAS2R13Q9NYV9 303 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 SLC28A2O43868 658 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 SPAG6O75602 509 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 RGS20O76081 388 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 DNTTP04053 509 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 MAT2AP31153 395 aaKnown RBP18.71■□□□□ 0.59
SHANK3-202ENST00000414786 METTL7BQ6UX53 244 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 GCNT7Q6ZNI0 430 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 PJA1Q8NG27 643 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 ITFG1Q8TB96 612 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 OSCP1Q8WVF1 389 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 C7orf25Q9BPX7 421 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 HES2Q9Y543 173 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 ROBO2Q9HCK4 1378 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 FCHO1O14526 889 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 ASNA1O43681 348 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 PSMD8P48556 350 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 BPIFB6Q8NFQ5 453 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 NCKIPSDQ9NZQ3 722 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 RGS14O43566 566 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 CXCR2P25025 360 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 CBX5P45973 191 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 ACSM2AQ08AH3 577 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 FAM91A1Q658Y4 838 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 ACSM2BQ68CK6 577 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 MAGEE2Q8TD90 523 aaPredicted RBP18.71■□□□□ 0.59
SHANK3-202ENST00000414786 KLK6Q92876 244 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 SMARCD1Q96GM5 515 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 GAL3ST4Q96RP7 486 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 KLHL4Q9C0H6 718 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 ARMCX1Q9P291 453 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 HTR1BP28222 390 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 RMND5BQ96G75 393 aaPredicted RBP18.71■□□□□ 0.59
SHANK3-202ENST00000414786 MCMBPQ9BTE3 642 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 RASSF1Q9NS23 344 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 INTS7Q9NVH2 962 aaKnown RBP18.71■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF780BQ9Y6R6 833 aa18.71■□□□□ 0.59
SHANK3-202ENST00000414786 BTN3A3O00478 584 aa18.7■□□□□ 0.58
SHANK3-202ENST00000414786 BACE1P56817 501 aa18.7■□□□□ 0.58
SHANK3-202ENST00000414786 C12orf50Q8NA57 414 aaPredicted RBP18.7■□□□□ 0.58
SHANK3-202ENST00000414786 GTPBP2Q9BX10 602 aaKnown RBP18.7■□□□□ 0.58
SHANK3-202ENST00000414786 FBXO6Q9NRD1 293 aaPredicted RBP18.7■□□□□ 0.58
SHANK3-202ENST00000414786 CFIP05156 583 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms