RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 AFF1P51825 1210 aaKnown RBP14.27□□□□□ -0.13
SCAF4-202ENST00000399804 RFWD3Q6PCD5 774 aa14.27□□□□□ -0.13
SCAF4-202ENST00000399804 TMEM199Q8N511 208 aa14.27□□□□□ -0.13
SCAF4-202ENST00000399804 NTAN1Q96AB6 310 aa14.27□□□□□ -0.13
SCAF4-202ENST00000399804 SUDS3Q9H7L9 328 aaPredicted RBP14.27□□□□□ -0.13
SCAF4-202ENST00000399804 CD274Q9NZQ7 290 aa14.27□□□□□ -0.13
SCAF4-202ENST00000399804 SSC5DA1L4H1 1573 aa14.27□□□□□ -0.13
SCAF4-202ENST00000399804 IRAK2O43187 625 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 TRIM13O60858 407 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 PTPN3P26045 913 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 HADHAP40939 763 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 CTBP1Q13363 440 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 TAF11Q15544 211 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 SLC1A5Q15758 541 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 TRIM54Q9BYV2 358 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 NMRAL1Q9HBL8 299 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 CHRAC1Q9NRG0 131 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 TRMT6Q9UJA5 497 aaKnown RBP14.26□□□□□ -0.13
SCAF4-202ENST00000399804 GOLGA4Q13439 2230 aaKnown RBP14.26□□□□□ -0.13
SCAF4-202ENST00000399804 KCNU1A8MYU2 1149 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 AIM2O14862 343 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 SERPINE1P05121 402 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 MPOP05164 745 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 ECHS1P30084 290 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 NAB1Q13506 487 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 RBBP7Q16576 425 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 TRMT10BQ6PF06 316 aaKnown RBP14.26□□□□□ -0.13
SCAF4-202ENST00000399804 PACS1Q6VY07 963 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 KYAT3Q6YP21 454 aaKnown RBP14.26□□□□□ -0.13
SCAF4-202ENST00000399804 CMC1Q7Z7K0 106 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 TMEM209Q96SK2 561 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 CIPCQ9C0C6 399 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 THAP1Q9NVV9 213 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 SPG21Q9NZD8 308 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 MFHAS1Q9Y4C4 1052 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 DLEC1Q9Y238 1755 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 H0YGN5 161 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 SHOX2O60902 331 aaPredicted RBP14.26□□□□□ -0.13
SCAF4-202ENST00000399804 MT-CYBP00156 380 aaPredicted RBP14.26□□□□□ -0.13
SCAF4-202ENST00000399804 GLUD2P49448 558 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 RASA2Q15283 850 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 ANKRD20A4Q4UJ75 823 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 MFN1Q8IWA4 741 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 FBXO22Q8NEZ5 403 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 PHF21BQ96EK2 531 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 MFSD3Q96ES6 412 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 CXCL16Q9H2A7 254 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 VPS9D1Q9Y2B5 631 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 NFS1Q9Y697 457 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 DDHD2O94830 711 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 SLC1A6P48664 564 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 ADGRD1Q6QNK2 874 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 DTX3LQ8TDB6 740 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 DYRK4Q9NR20 520 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 DNAJB4Q9UDY4 337 aa14.26□□□□□ -0.13
SCAF4-202ENST00000399804 HAS3O00219 553 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 FAM189A1O60320 539 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 AP2A1O95782 977 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 SERPINB3P29508 390 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 HIC1Q14526 733 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 SLC9A4Q6AI14 798 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 ZNF296Q8WUU4 475 aaPredicted RBP14.25□□□□□ -0.13
SCAF4-202ENST00000399804 CASP10Q92851 521 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 CORO1BQ9BR76 489 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 TM6SF2Q9BZW4 377 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 CDYLQ9Y232 598 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 FAM95CA0A1B0GW59 222 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 RGS4P49798 205 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 BST1Q10588 318 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 MSS51Q4VC12 460 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 PPM1LQ5SGD2 360 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 SPOCK2Q92563 424 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 MECRQ9BV79 373 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 UNC93B1Q9H1C4 597 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 RGS18Q9NS28 235 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 NCKIPSDQ9NZQ3 722 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 STOML1Q9UBI4 398 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 LGALS13Q9UHV8 139 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 VPS26AO75436 327 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 ENO3P13929 434 aaPredicted RBP14.25□□□□□ -0.13
SCAF4-202ENST00000399804 GATMP50440 423 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 PLK1P53350 603 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 IMPG1Q17R60 797 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 CCDC153Q494R4 210 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 PPP1R15BQ5SWA1 713 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 CYB5D1Q6P9G0 228 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 GLT6D1Q7Z4J2 308 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 CIR1Q86X95 450 aaPredicted RBP14.25□□□□□ -0.13
SCAF4-202ENST00000399804 YAF2Q8IY57 180 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 SLC26A7Q8TE54 656 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 PPP2R3CQ969Q6 453 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 CMTM5Q96DZ9 223 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 APOL5Q9BWW9 433 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 EMILIN2Q9BXX0 1053 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 FBXO6Q9NRD1 293 aaPredicted RBP14.25□□□□□ -0.13
SCAF4-202ENST00000399804 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.25□□□□□ -0.137e-11■■■□□ 19.1
SCAF4-202ENST00000399804 ANGPTL2Q9UKU9 493 aa14.25□□□□□ -0.13
SCAF4-202ENST00000399804 NCF1BA6NI72 391 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms