RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 RHAGQ02094 409 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 CAV1Q03135 178 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 CAPRIN1Q14444 709 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 CLCA4Q14CN2 919 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 PDK3Q15120 406 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TYSND1Q2T9J0 566 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 GRAMD1BQ3KR37 738 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 DPCR1Q3MIW9 517 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 WDR72Q3MJ13 1102 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ZBED5Q49AG3 693 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TIGD2Q4W5G0 525 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 IGSF11Q5DX21 431 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 BRMS1LQ5PSV4 323 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ODR4Q5SWX8 454 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 GARNL3Q5VVW2 1013 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ZNF544Q6NX49 715 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 MZT2BQ6NZ67 158 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 C3orf33Q6P1S2 294 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 BLOC1S2Q6QNY1 142 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 UTS2BQ765I0 119 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 GPR142Q7Z601 462 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 NECAB2Q7Z6G3 386 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ANKS1BQ7Z6G8 1248 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SETD3Q86TU7 594 aaPredicted RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TTC7BQ86TV6 843 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 IRF2BP1Q8IU81 584 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 BBS7Q8IWZ6 715 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ULK2Q8IYT8 1036 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 DCP1BQ8IZD4 617 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ZDHHC14Q8IZN3 488 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SYCE1Q8N0S2 351 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 OR8H2Q8N162 312 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TAB3Q8N5C8 712 aaPredicted RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 FITM2Q8N6M3 262 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ANKFN1Q8N957 763 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 C12orf29Q8N999 325 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SNX31Q8N9S9 440 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TMIEQ8NEW7 156 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ADCY4Q8NFM4 1077 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ZFP28Q8NHY6 868 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 VANGL1Q8TAA9 524 aaPredicted RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SLC30A5Q8TAD4 765 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 PIWIL2Q8TC59 973 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ACTRT1Q8TDG2 376 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SYTL5Q8TDW5 730 aaPredicted RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 UCMAQ8WVF2 138 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 CKAP2Q8WWK9 683 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 PYDC1Q8WXC3 89 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TRIB2Q92519 343 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 WASF1Q92558 559 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 FIG4Q92562 907 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 DACT3Q96B18 629 aaPredicted RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 HDAC11Q96DB2 347 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 C18orf8Q96DM3 657 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 MTERF3Q96E29 417 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 OMA1Q96E52 524 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 CAPZA3Q96KX2 299 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 PPP3R2Q96LZ3 170 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 AK8Q96MA6 479 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TESK2Q96S53 571 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 DNAJC7Q99615 494 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 C17orf62Q9BQA9 187 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 PELOQ9BRX2 385 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TMEM79Q9BSE2 394 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 LRRC1Q9BTT6 524 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TBCDQ9BTW9 1192 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 NOC4LQ9BVI4 516 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 CCDC106Q9BWC9 280 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 BTBD2Q9BX70 525 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 OSBPL8Q9BZF1 889 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SLC19A3Q9BZV2 496 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ABCG8Q9H221 673 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SYNDIG1Q9H7V2 258 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 MRPL44Q9H9J2 332 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 MRM3Q9HC36 420 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 EPB41L5Q9HCM4 733 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 OLFML3Q9NRN5 406 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 RGS18Q9NS28 235 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TBC1D22BQ9NU19 505 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 MALT1Q9UDY8 824 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TRMT6Q9UJA5 497 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 MID2Q9UJV3 735 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 BAG5Q9UL15 447 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 DENND2AQ9ULE3 1009 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 CAPN11Q9UMQ6 739 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 POLHQ9Y253 713 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 MTO1Q9Y2Z2 717 aaKnown RBP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 TBX22Q9Y458 520 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 NFS1Q9Y697 457 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 IVNS1ABPQ9Y6Y0 642 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SYCP2Q9BX26 1530 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 ADGRB2O60241 1585 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 CD109Q6YHK3 1445 aa3.67□□□□□ -1.82
XRCC4-203ENST00000396027 SSU72P8A0A1W2PR75 194 aa3.66□□□□□ -1.82
XRCC4-203ENST00000396027 TMEM82A0PJX8 343 aa3.66□□□□□ -1.82
XRCC4-203ENST00000396027 PQLC2LA1A4F0 135 aa3.66□□□□□ -1.82
XRCC4-203ENST00000396027 HEATR9A2RTY3 570 aa3.66□□□□□ -1.82
XRCC4-203ENST00000396027 SAC3D1A6NKF1 404 aa3.66□□□□□ -1.82
XRCC4-203ENST00000396027 BTNL10A8MVZ5 291 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms