RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 RAMP2O60895 175 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CABYRO75952 493 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 MTA2O94776 668 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 MED26O95402 600 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 LTFP02788 710 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ERVK-10P10266 1014 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PTPRAP18433 802 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 LRPAP1P30533 357 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PKNOX1P55347 436 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CES3Q6UWW8 571 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 UNC5AQ6ZN44 842 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 APTXQ7Z2E3 356 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 TDRPQ86YL5 185 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 LRRC49Q8IUZ0 686 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 TSPAN14Q8NG11 270 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SLC2A14Q8TDB8 520 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 TRPC4APQ8TEL6 797 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 FNIP1Q8TF40 1166 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ELMO3Q96BJ8 720 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SMARCD1Q96GM5 515 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CELF6Q96J87 481 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 RNF145Q96MT1 663 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SERPINB11Q96P15 392 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 C1orf50Q9BV19 199 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ACE2Q9BYF1 805 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 GIMAP4Q9NUV9 329 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ATAD3AQ9NVI7 634 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ETAA1Q9NY74 926 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ANAPC2Q9UJX6 822 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PRG3Q9Y2Y8 225 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 NCF1BA6NI72 391 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 NCF1CA8MVU1 366 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 RAD51BO15315 384 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CD3EAPO15446 510 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 MGRN1O60291 552 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ZNF682O95780 498 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SNRPB2P08579 225 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 NCF1P14598 390 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 SOAT1P35610 550 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CCNG1P51959 295 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PSME3P61289 254 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SQLEQ14534 574 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 INSCQ1MX18 579 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 TMEM26Q6ZUK4 368 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 AADATQ8N5Z0 425 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 FNDC5Q8NAU1 212 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 METTL6Q8TCB7 284 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SLC44A1Q8WWI5 657 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 KREMEN1Q96MU8 473 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 DCUN1D5Q9BTE7 237 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 MRPS26Q9BYN8 205 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 GRIP2Q9C0E4 1043 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 LHX5Q9H2C1 402 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 POMKQ9H5K3 350 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CDHR5Q9HBB8 845 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SCUBE2Q9NQ36 999 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 STMN3Q9NZ72 180 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CXCL11O14625 94 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ZNF862O60290 1169 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 RECQL5O94762 991 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 ITGA2BP08514 1039 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 LTA4HP09960 611 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 SLC2A4P14672 509 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ITGB5P18084 799 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PIK3R1P27986 724 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 GJA5P36382 358 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PIK3CGP48736 1102 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 JAM2P57087 298 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 HPCAP84074 193 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 TOP3AQ13472 1001 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 DDX39BQ13838 428 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 C1DQ13901 141 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 NCF4Q15080 339 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 DGUOKQ16854 277 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 C15orf59Q2T9L4 293 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 METTL21CQ5VZV1 264 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ADCK2Q7Z695 626 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ECHDC2Q86YB7 292 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 TMEM86AQ8N2M4 240 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 MBOAT7Q96N66 472 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 CDK5RAP1Q96SZ6 601 aaKnown RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 PCDHB18PQ96TA0 734 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PRRG3Q9BZD7 231 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 VTA1Q9NP79 307 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 KCNH4Q9UQ05 1017 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PLIN4Q96Q06 1357 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 A0A1W2PPM1 405 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SLC12A8A0AV02 714 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 MGAT4DA6NG13 374 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PRR23D1E9PI22 279 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 DNM1LO00429 736 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 IRF6O14896 467 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 KPNA6O60684 536 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 MAGEC1O60732 1142 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
VPS36-201ENST00000378060 BPGMP07738 259 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 ANXA6P08133 673 aa8.51□□□□□ -1.05
VPS36-201ENST00000378060 PRR23D2P0DMB1 279 aaPredicted RBP8.51□□□□□ -1.05
VPS36-201ENST00000378060 PSMB9P28065 219 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms