RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SLC12A1Q13621 1099 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 GAB4Q2WGN9 574 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ITPRIPL2Q3MIP1 535 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PUS10Q3MIT2 529 aaKnown RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 LINGO4Q6UY18 593 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 SYDE1Q6ZW31 735 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ETFBKMTQ8IXQ9 262 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 SLC44A3Q8N4M1 653 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 LMLNQ96KR4 655 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 C2orf49Q9BVC5 232 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 DPH5Q9H2P9 285 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PCDH9Q9HC56 1237 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 VPS51Q9UID3 782 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 FBXO10Q9UK96 956 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 TTLL3Q9Y4R7 772 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 NYNRINQ9P2P1 1898 aaKnown RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 C5orf60A6NFR6 353 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PEX11BO96011 259 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PABPC1P11940 636 aaKnown RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ADCY8P40145 1251 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 SLC6A11P48066 632 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 SLC10A7Q0GE19 358 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 MESP2Q0VG99 397 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 GPS1Q13098 491 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PTK6Q13882 451 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 HNRNPDQ14103 355 aaKnown RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 TRADDQ15628 312 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 TEX44Q53QW1 395 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PITRM1Q5JRX3 1037 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ANKRD20A2Q5SQ80 823 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ANKRD20A1Q5TYW2 823 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 MARC1Q5VT66 337 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ANKRD20A3Q5VUR7 823 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 NAIF1Q69YI7 327 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 PID1Q7Z2X4 250 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ZNF567Q8N184 647 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 DCAF4L2Q8NA75 395 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 NSMCE1Q8WV22 266 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 NXPE3Q969Y0 559 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 ZNF419Q96HQ0 510 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 RAB17Q9H0T7 212 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 EPB41L5Q9HCM4 733 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 RBM22Q9NW64 420 aaKnown RBP eCLIP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 KLHL8Q9P2G9 620 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 DEC1Q9P2X7 70 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 CHD5Q8TDI0 1954 aa11.17□□□□□ -0.62
BRCC3-204ENST00000369462 MYO18AQ92614 2054 aaKnown RBP11.17□□□□□ -0.62
BRCC3-204ENST00000369462 A0A0A0MRY4 1105 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 GCATO75600 419 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 ZMPSTE24O75844 475 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 NEBLO76041 1014 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 RENBPP51606 427 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 ARF5P84085 180 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 GEN1Q17RS7 908 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 P3H1Q32P28 736 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 FUT11Q495W5 492 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 ARHGEF18Q6ZSZ5 1173 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.16□□□□□ -0.62
BRCC3-204ENST00000369462 CNTD1Q8N815 330 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 SPATA13Q96N96 652 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 ANKZF1Q9H8Y5 726 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 PDFQ9HBH1 243 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 IGSF9Q9P2J2 1179 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 SNX24Q9Y343 169 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 F5H423 210 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-204ENST00000369462 MT-CO1P00395 513 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 CISD3P0C7P0 127 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 SOX9P48436 509 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 PLK1P53350 603 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 IFI35P80217 286 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-204ENST00000369462 ELF2Q15723 593 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 CSGALNACT1Q8TDX6 532 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 MAML1Q92585 1016 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 ACDQ96AP0 544 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 TEKT5Q96M29 485 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 VAT1Q99536 393 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 IL12RB2Q99665 862 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 PAK5Q9P286 719 aa11.16□□□□□ -0.62
BRCC3-204ENST00000369462 UBA2Q9UBT2 640 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-204ENST00000369462 ZBTB24O43167 697 aaPredicted RBP11.15□□□□□ -0.62
BRCC3-204ENST00000369462 OPHN1O60890 802 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 ZNF189O75820 626 aaPredicted RBP11.15□□□□□ -0.62
BRCC3-204ENST00000369462 RPL21P46778 160 aaKnown RBP11.15□□□□□ -0.62
BRCC3-204ENST00000369462 LBRQ14739 615 aaKnown RBP11.15□□□□□ -0.62
BRCC3-204ENST00000369462 FAXCQ5TGI0 409 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 TMCO4Q5TGY1 634 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 TMEM215Q68D42 235 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 DUPD1Q68J44 220 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 RETSATQ6NUM9 610 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 ADIPOR2Q86V24 386 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 CCHCR1Q8TD31 782 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 FATE1Q969F0 183 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 RPL10LQ96L21 214 aaKnown RBP11.15□□□□□ -0.62
BRCC3-204ENST00000369462 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.62
BRCC3-204ENST00000369462 CD160O95971 181 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 IVDP26440 423 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 OPRD1P41143 372 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 CTSOP43234 321 aaPredicted RBP11.15□□□□□ -0.62
BRCC3-204ENST00000369462 MMP13P45452 471 aa11.15□□□□□ -0.62
BRCC3-204ENST00000369462 KDSRQ06136 332 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms