RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 AGBL4Q5VU57 503 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 PRPF39Q86UA1 669 aaKnown RBP18.17■□□□□ 0.5
HDDC3-201ENST00000330334 TRIM69Q86WT6 500 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 PHF13Q86YI8 300 aaPredicted RBP18.17■□□□□ 0.5
HDDC3-201ENST00000330334 CHCHD4Q8N4Q1 142 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 EMC1Q8N766 993 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 OR2A12Q8NGT7 310 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 SLC30A5Q8TAD4 765 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 PIP4K2CQ8TBX8 421 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 RHBDD1Q8TEB9 315 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 RXFP2Q8WXD0 754 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 SLC6A18Q96N87 628 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 PCDHB18PQ96TA0 734 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 HSD3B7Q9H2F3 369 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 ARHGAP20Q9P2F6 1191 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 DMTF1Q9Y222 760 aa18.17■□□□□ 0.5
HDDC3-201ENST00000330334 IGF2RP11717 2491 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 A0A1B0GTQ1 180 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 H0Y8X5 98 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 WNT1P04628 370 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 KRT3P12035 628 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 GRK6P43250 576 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 NSFP46459 744 aaKnown RBP18.16■□□□□ 0.5
HDDC3-201ENST00000330334 METAP1P53582 386 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 ATP11AP98196 1134 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 CNTN1Q12860 1018 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 OVGP1Q12889 678 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 CLEC16AQ2KHT3 1053 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 SLC45A4Q5BKX6 768 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 MANEALQ5VSG8 457 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 RETSATQ6NUM9 610 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 NEK5Q6P3R8 708 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 LAYNQ6UX15 382 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 TFAP2DQ7Z6R9 452 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 IQCHQ86VS3 1027 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 SERAC1Q96JX3 654 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 PCMTD1Q96MG8 357 aaPredicted RBP18.16■□□□□ 0.5
HDDC3-201ENST00000330334 C11orf70Q9BRQ4 267 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 CEP44Q9C0F1 390 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 ERVMER34-1Q9H9K5 563 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 PREBQ9HCU5 417 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 ADAM22Q9P0K1 906 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 OR12D3Q9UGF7 316 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 KLK13Q9UKR3 277 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 ZZEF1O43149 2961 aa18.16■□□□□ 0.5
HDDC3-201ENST00000330334 YKT6O15498 198 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 RTN2O75298 545 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 ZMPSTE24O75844 475 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 KRT37O76014 449 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 PRNPP04156 253 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 CALB1P05937 261 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 CCDC172P0C7W6 258 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 CHRNA3P32297 505 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 ETFBP38117 255 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 GNA12Q03113 381 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 INAVAQ3KP66 663 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 NAPEPLDQ6IQ20 393 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 SLCO6A1Q86UG4 719 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 MFSD2AQ8NA29 543 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 C3orf20Q8ND61 904 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 ELF4Q99607 663 aaPredicted RBP18.15■□□□□ 0.5
HDDC3-201ENST00000330334 NAT10Q9H0A0 1025 aaKnown RBP18.15■□□□□ 0.5
HDDC3-201ENST00000330334 AASDHPPTQ9NRN7 309 aa18.15■□□□□ 0.5
HDDC3-201ENST00000330334 CFAP47Q6ZTR5 3102 aa18.14■□□□□ 0.5
HDDC3-201ENST00000330334 SIGLEC16A6NMB1 481 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 K7ERQ8 282 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 TLR4O00206 839 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 KCNK3O14649 394 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 SMAD6O43541 496 aaKnown RBP18.14■□□□□ 0.49
HDDC3-201ENST00000330334 TNFSF14O43557 240 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 RNGTTO60942 597 aaKnown RBP18.14■□□□□ 0.49
HDDC3-201ENST00000330334 CTSLP07711 333 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 RHOQP17081 205 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 RRM1P23921 792 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 RFC1P35251 1148 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-201ENST00000330334 PPP2CBP62714 309 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 PPP2CAP67775 309 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
HDDC3-201ENST00000330334 C15orf59Q2T9L4 293 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-201ENST00000330334 PIP5KL1Q5T9C9 394 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 PLPP6Q8IY26 295 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 OR7D4Q8NG98 312 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 JOSD2Q8TAC2 188 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 NTAN1Q96AB6 310 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 BPIFA3Q9BQP9 254 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 HDAC8Q9BY41 377 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 GDF3Q9NR23 364 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 TOR4AQ9NXH8 423 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 MYO6Q9UM54 1294 aa18.14■□□□□ 0.49
HDDC3-201ENST00000330334 DMXL2Q8TDJ6 3036 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 CHD6Q8TD26 2715 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 FAM170AA1A519 330 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 CBX4O00257 560 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 PLK4O00444 970 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 WNT9AO14904 365 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 MAGEC1O60732 1142 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 ZNF821O75541 412 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-201ENST00000330334 RECQLP46063 649 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-201ENST00000330334 RXRGP48443 463 aa18.13■□□□□ 0.49
HDDC3-201ENST00000330334 MAPKAPK2P49137 400 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms