RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CMTM5Q96DZ9 223 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 THTPAQ9BU02 230 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 OR12D3Q9UGF7 316 aa25.52■■□□□ 1.68
ROM1-201ENST00000278833 ARHGAP42A6NI28 874 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 M0QZ92 97 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 LRIG2O94898 1065 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 AP2B1P63010 937 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 FSCN1Q16658 493 aaKnown RBP25.51■■□□□ 1.67
ROM1-201ENST00000278833 ANO4Q32M45 955 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 PLD6Q8N2A8 252 aaKnown RBP25.51■■□□□ 1.67
ROM1-201ENST00000278833 ADAM32Q8TC27 787 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 AGAP3Q96P47 875 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 KCNK16Q96T55 309 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 TKTL2Q9H0I9 626 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 ARHGEF38Q9NXL2 777 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 TRIM13O60858 407 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 C2P06681 752 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 IGFBP6P24592 240 aaPredicted RBP25.51■■□□□ 1.67
ROM1-201ENST00000278833 CCNCP24863 283 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 CLCNKBP51801 687 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 OLIG2Q13516 323 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 FSCBQ5H9T9 825 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 SLAIN1Q8ND83 568 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 ACTRT2Q8TDY3 377 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 PTCD2Q8WV60 388 aaKnown RBP25.51■■□□□ 1.67
ROM1-201ENST00000278833 VPS39Q96JC1 886 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 PKMYT1Q99640 499 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 ACBD6Q9BR61 282 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 RHOJQ9H4E5 214 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 MRM3Q9HC36 420 aaKnown RBP25.51■■□□□ 1.67
ROM1-201ENST00000278833 NLRC5Q86WI3 1866 aa25.51■■□□□ 1.67
ROM1-201ENST00000278833 MAP3K7O43318 606 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 COL6A2P12110 1019 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 ANPEPP15144 967 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 CERCAMQ5T4B2 595 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 TRIM68Q6AZZ1 485 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 TAC4Q86UU9 113 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 C3orf58Q8NDZ4 430 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 JADE3Q92613 823 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 MYLPFQ96A32 169 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 MFSD3Q96ES6 412 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 GAD1Q99259 594 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 AGAP2Q99490 1192 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 RTP3Q9BQQ7 232 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 IL1RAPL1Q9NZN1 696 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 AAR2Q9Y312 384 aaKnown RBP25.5■■□□□ 1.67
ROM1-201ENST00000278833 SHROOM3Q8TF72 1996 aa25.5■■□□□ 1.67
ROM1-201ENST00000278833 SLC22A2O15244 555 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 USP12O75317 370 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 SRGAP2BP0DMP2 458 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 ODC1P11926 461 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 GSTA3Q16772 222 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 UPP1Q16831 310 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 HSP90AA5PQ58FG0 334 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 BRMS1LQ5PSV4 323 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 ZYG11AQ6WRX3 759 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 KIRREL3Q8IZU9 778 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 FCRL5Q96RD9 977 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 NMRAL1Q9HBL8 299 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 ST3GAL5Q9UNP4 418 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 SESN3P58005 492 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 MXRA7P84157 204 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 BEX3Q00994 111 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 TRIM32Q13049 653 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 CAPRIN2Q6IMN6 1127 aaKnown RBP25.49■■□□□ 1.67
ROM1-201ENST00000278833 LZTR1Q8N653 840 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 HAPLN3Q96S86 360 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 ZNF184Q99676 751 aaPredicted RBP25.49■■□□□ 1.67
ROM1-201ENST00000278833 C1QTNF1Q9BXJ1 281 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 SENP6Q9GZR1 1112 aaPredicted RBP25.49■■□□□ 1.67
ROM1-201ENST00000278833 C20orf96Q9NUD7 363 aaPredicted RBP25.49■■□□□ 1.67
ROM1-201ENST00000278833 ZNF358Q9NW07 568 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 OXSMQ9NWU1 459 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 MIOSQ9NXC5 875 aa25.49■■□□□ 1.67
ROM1-201ENST00000278833 MEIS3P2A8K0S8 358 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 UGP2Q16851 508 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 MANEALQ5VSG8 457 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 C1orf146Q5VVC0 180 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 RSPH3Q86UC2 560 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 ZC3HC1Q86WB0 502 aaKnown RBP25.48■■□□□ 1.67
ROM1-201ENST00000278833 DQX1Q8TE96 717 aaKnown RBP25.48■■□□□ 1.67
ROM1-201ENST00000278833 IL12RB2Q99665 862 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 FAM167BQ9BTA0 163 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 DMAP1Q9NPF5 467 aaPredicted RBP25.48■■□□□ 1.67
ROM1-201ENST00000278833 SUFUQ9UMX1 484 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 WASF2Q9Y6W5 498 aa25.48■■□□□ 1.67
ROM1-201ENST00000278833 ARL5CA6NH57 179 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 FGF10O15520 208 aaPredicted RBP25.47■■□□□ 1.67
ROM1-201ENST00000278833 HSPA4LO95757 839 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 MICAL1Q8TDZ2 1067 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 CNDP1Q96KN2 507 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 DSEQ9UL01 958 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 ZNF623O75123 536 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 CABYRO75952 493 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 ANXA9O76027 345 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 GLDCP23378 1020 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 MGAT3Q09327 533 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 TIGD5Q53EQ6 642 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 PCID2Q5JVF3 399 aa25.47■■□□□ 1.67
ROM1-201ENST00000278833 AGMOQ6ZNB7 445 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms