RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 PIK3C3Q8NEB9 887 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 ADAM32Q8TC27 787 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 HAVCR1Q96D42 359 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 SH3BGRL2Q9UJC5 107 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 CROTQ9UKG9 612 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 SAMD9Q5K651 1589 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 SERPINA3P01011 423 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 GDI2P50395 445 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 OXCT1P55809 520 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 CENPCQ03188 943 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 UGT3A1Q6NUS8 523 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 KBTBD7Q8WVZ9 684 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 NELFEP18615 380 aaKnown RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 CTSOP43234 321 aaPredicted RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 ZC2HC1CQ53FD0 456 aaPredicted RBP11.26□□□□□ -0.61
MSH6-201ENST00000234420 FNBP1LQ5T0N5 605 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 CYB5R4Q7L1T6 521 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 PAGE2Q7Z2X7 111 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 PRSS58Q8IYP2 241 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 TNKS2Q9H2K2 1166 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 LYVE1Q9Y5Y7 322 aa11.26□□□□□ -0.61
MSH6-201ENST00000234420 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 CXCL14O95715 111 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 H2AFXP16104 143 aaPredicted RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 GSTM5P46439 218 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 RPL10AP62906 217 aaKnown RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 SLCO6A1Q86UG4 719 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CHPFQ8IZ52 775 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 HPF1Q9NWY4 346 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 MARK1Q9P0L2 795 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 DGKBQ9Y6T7 804 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 SH3D21A4FU49 640 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 VPS26AO75436 327 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 NADKO95544 446 aaPredicted RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 TFPIP10646 304 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 TGM2P21980 687 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 TGM3Q08188 693 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 KYAT1Q16773 422 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ZNF354BQ96LW1 612 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ACAT2Q9BWD1 397 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 DMTF1Q9Y222 760 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 FAM240BA0A1B0GVZ2 78 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 OR14I1A6ND48 311 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ZSCAN5CA6NGD5 496 aaPredicted RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 STX16-NPEPL1H3BU86 382 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 STX16O14662 325 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 DHFRP00374 187 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CHRNGP07510 517 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ME2P23368 584 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 NT5C2P49902 561 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 MYBPC1Q00872 1141 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 PTK6Q13882 451 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 UBE3CQ15386 1083 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 RNF220Q5VTB9 566 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 RAET1GQ6H3X3 334 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 SHQ1Q6PI26 577 aaKnown RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 PLET1Q6UQ28 207 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 FRMD7Q6ZUT3 714 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 TTC7BQ86TV6 843 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 RASGRP3Q8IV61 690 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 FAM20CQ8IXL6 584 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 GRPEL2Q8TAA5 225 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CXorf40BQ96DE9 158 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ZSCAN5AQ9BUG6 496 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ABCG8Q9H221 673 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 SLC6A15Q9H2J7 730 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 DPP7Q9UHL4 492 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 EDARQ9UNE0 448 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 UBDO15205 165 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 PLA2G6O60733 806 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 KLK7P49862 253 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 S100A12P80511 92 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 PAGE2BQ5JRK9 111 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CDADC1Q9BWV3 514 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CEP41Q9BYV8 373 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CLPBQ9H078 707 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ABCA10Q8WWZ4 1543 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CST8O60676 142 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 FKTNO75072 461 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 IFNA14P01570 189 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 PHC1P78364 1004 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 PLGLB1Q02325 96 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CDK20Q8IZL9 346 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 LINC00116Q8NCU8 138 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ZNF540Q8NDQ6 660 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 HEG1Q9ULI3 1381 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 PDS5AQ29RF7 1337 aaKnown RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 TP73O15350 636 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CES1P23141 567 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 AP5B1Q2VPB7 878 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 SLC39A12Q504Y0 691 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 P4HA3Q7Z4N8 544 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 CIR1Q86X95 450 aaPredicted RBP11.25□□□□□ -0.61
MSH6-201ENST00000234420 RAB43Q86YS6 212 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 SP8Q8IXZ3 490 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 SUN3Q8TAQ9 357 aa11.25□□□□□ -0.61
MSH6-201ENST00000234420 ATG4CQ96DT6 458 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms