RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 TBC1D3GQ6DHY5 549 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3CQ6IPX1 549 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 OLFML1Q6UWY5 402 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 DHRS13Q6UX07 377 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 SLC47A2Q86VL8 602 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D3Q8IZP1 549 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-221ENST00000619555 SKA1Q96BD8 255 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 SERAC1Q96JX3 654 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 SPAG5Q96R06 1193 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 BPIFA3Q9BQP9 254 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 FEM1AQ9BSK4 669 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 PLCB1Q9NQ66 1216 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 FTSJ1Q9UET6 329 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 DNAJC12Q9UKB3 198 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 RAXQ9Y2V3 346 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 GPSM3Q9Y4H4 160 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 OR51B4Q9Y5P0 310 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 SNX10Q9Y5X0 201 aa11.48□□□□□ -0.57
TARDBP-221ENST00000619555 TDRD6O60522 2096 aaKnown RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 FAM170AA1A519 330 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 GTPBP10A4D1E9 387 aaKnown RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 M0QYT0 321 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 TLR4O00206 839 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 ATP9BO43861 1147 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 DAB1O75553 588 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 CNTN5O94779 1100 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 ADCY5O95622 1261 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 ITGAVP06756 1048 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 TFE3P19532 575 aaPredicted RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 MAT2AP31153 395 aaKnown RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 KRT9P35527 623 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 OXCT1P55809 520 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 NXPH1P58417 271 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 CYP4F3Q08477 520 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 CNTN1Q12860 1018 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 BNIP3Q12983 259 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 ZNF177Q13360 481 aaPredicted RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 SKOR2Q2VWA4 1001 aaPredicted RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 INAVAQ3KP66 663 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 Q6ZVU0 165 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 SLC26A9Q7LBE3 791 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 GALNT15Q8N3T1 639 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 SAP25Q8TEE9 199 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 FAM131CQ96AQ9 280 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 NOX5Q96PH1 765 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 SIK2Q9H0K1 926 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 VPS16Q9H269 839 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 SYNCQ9H7C4 482 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 ANLNQ9NQW6 1124 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 GDF3Q9NR23 364 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 ARHGAP20Q9P2F6 1191 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 LIMA1Q9UHB6 759 aaKnown RBP11.47□□□□□ -0.57
TARDBP-221ENST00000619555 SLC25A13Q9UJS0 675 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 VPS28Q9UK41 221 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 PPM1HQ9ULR3 514 aa11.47□□□□□ -0.57
TARDBP-221ENST00000619555 I6L893 689 aaPredicted RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 ENC1O14682 589 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 LATO43561 262 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 BNIP3LO60238 219 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 SNAP91O60641 907 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 CLDN11O75508 207 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 LDOC1O95751 146 aaPredicted RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 MT-CO1P00395 513 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 NOS2P35228 1153 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 KLK7P49862 253 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 ZNF165P49910 485 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 VASPP50552 380 aaPredicted RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 COPB1P53618 953 aaKnown RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 CLDN6P56747 220 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 RNASE9P60153 205 aaKnown RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 DNAJC3Q13217 504 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 COL28A1Q2UY09 1125 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 C5orf22Q49AR2 442 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 ALFQ53S48 1182 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 AGBL4Q5VU57 503 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 FAM46CQ5VWP2 391 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 NAPEPLDQ6IQ20 393 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 DSG4Q86SJ6 1040 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 PRPF39Q86UA1 669 aaKnown RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 SPATS2Q86XZ4 545 aaKnown RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 SH2D3CQ8N5H7 860 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 EID2Q8N6I1 236 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 ZNF397Q8NF99 534 aaPredicted RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 PIP4K2CQ8TBX8 421 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 HNRNPLLQ8WVV9 542 aaKnown RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 CNDP2Q96KP4 475 aaKnown RBP11.46□□□□□ -0.57
TARDBP-221ENST00000619555 PPP1R9BQ96SB3 815 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 NPY6RQ99463 290 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 TKTL2Q9H0I9 626 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 CBX8Q9HC52 389 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 TMPRSS4Q9NRS4 437 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 PIGVQ9NUD9 493 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 CA5BQ9Y2D0 317 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 TBC1D30Q9Y2I9 924 aa11.46□□□□□ -0.57
TARDBP-221ENST00000619555 MCF2LO15068 1137 aa11.45□□□□□ -0.58
TARDBP-221ENST00000619555 SLC7A4O43246 635 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms