RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 CYLC1P35663 651 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 DPP6P42658 865 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 HCAR3P49019 387 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 YBEYP58557 167 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 RPS14P62263 151 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 ELAVL3Q14576 367 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 POLD3Q15054 466 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 C9orf64Q5T6V5 341 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 RHOT2Q8IXI1 618 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 SH2D3CQ8N5H7 860 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 OR7D4Q8NG98 312 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 ARHGEF2Q92974 986 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 PACSIN1Q9BY11 444 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 ZWILCHQ9H900 591 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 GPATCH2LQ9NWQ4 482 aa17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 USP36Q9P275 1121 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-212ENST00000596163 ZSCAN5CA6NGD5 496 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 SNAP91O60641 907 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 BCKDHBP21953 392 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 ARL4AP40617 200 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 SSR1P43307 286 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 DHPSP49366 369 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 NUMBP49757 651 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 TPMTP51580 245 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 RPL6Q02878 288 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 SPA17Q15506 151 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 PPP6R3Q5H9R7 873 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 TMTC1Q8IUR5 882 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 TEKT4Q8WW24 435 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 OR8D1Q8WZ84 308 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 PTPRN2Q92932 1015 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 BTBD6Q96KE9 485 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 PEBP4Q96S96 227 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 ACE2Q9BYF1 805 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 MTG2Q9H4K7 406 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 IMPACTQ9P2X3 320 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 MBD1Q9UIS9 605 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 NEU3Q9UQ49 428 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 PIEZO1Q92508 2521 aa17.68■□□□□ 0.42
SHKBP1-212ENST00000596163 H3BRJ5 948 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 ALOX15BO15296 676 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 PROSCO94903 275 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 IPO7O95373 1038 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 ADH1BP00325 375 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 IGLV3-19P01714 112 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 SRCP12931 536 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 ARHGAP25P42331 645 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 MAGEA1P43355 309 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 RECQLP46063 649 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 CA9Q16790 459 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 PARP15Q460N3 678 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 FAM46CQ5VWP2 391 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 RFX8Q6ZV50 586 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 ZNF354CQ86Y25 554 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 UMODL1-AS1Q8N2C9 162 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 SLC35G2Q8TBE7 412 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 GANCQ8TET4 914 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 FRS2Q8WU20 508 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 FOXJ1Q92949 421 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 KCTD15Q96SI1 283 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 CEP44Q9C0F1 390 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 ARRDC1-AS1Q9H2J1 176 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 NDFIP2Q9NV92 336 aa17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 WSB2Q9NYS7 404 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-212ENST00000596163 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 KDELR3O43731 214 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 ZMPSTE24O75844 475 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 ACVRL1P37023 503 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 NDST2P52849 883 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 CREB5Q02930 508 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 CST6Q15828 149 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 DPYSL2Q16555 572 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 USP30Q70CQ3 517 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 CYP2U1Q7Z449 544 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 CACUL1Q86Y37 369 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 TMEFF1Q8IYR6 380 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 STK40Q8N2I9 435 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 DCLK2Q8N568 766 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 FRMD1Q8N878 549 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 RFFLQ8WZ73 363 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 HSPH1Q92598 858 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 TOE1Q96GM8 510 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 FAM129BQ96TA1 746 aa17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 PABPC3Q9H361 631 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-212ENST00000596163 BCLAF3A2AJT9 711 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 C1QTNF3-AMACRE9PGA6 284 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 MCF2LO15068 1137 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 LCA5LO95447 670 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 MT-CO1P00395 513 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 IL1BP01584 269 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 KRT7P08729 469 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 RARAP10276 462 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 GOT1P17174 413 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 C5AR1P21730 350 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 IL1R2P27930 398 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 SLC8A1P32418 973 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 MAN1A1P33908 653 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 SERPINH1P50454 418 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 KRT81Q14533 505 aa17.65■□□□□ 0.42
SHKBP1-212ENST00000596163 TCEAL1Q15170 157 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms