RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 ASNSD1Q9NWL6 643 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 MYO6Q9UM54 1294 aa18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 COL5A1P20908 1838 aaPredicted RBP18.06■□□□□ 0.48
SHKBP1-203ENST00000594298 KCNU1A8MYU2 1149 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 F5H5T6 163 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 ENC1O14682 589 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 WNT9AO14904 365 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 LDOC1O95751 146 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 TPM3P06753 285 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 ITGAVP06756 1048 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 C1SP09871 688 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 FERP16591 822 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 NNMTP40261 264 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 ARRB1P49407 418 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 OXCT1P55809 520 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 UBASH3AP57075 661 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 NXPH1P58417 271 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 CDR2Q01850 454 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 SULT2A1Q06520 285 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 SLC45A4Q5BKX6 768 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 PRAMEF14Q5SWL7 426 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 OR6B2Q6IFH4 312 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 TRIM72Q6ZMU5 477 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 NOP9Q86U38 636 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 ERICH1Q86X53 443 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 ATP6V0D2Q8N8Y2 350 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 OR14C36Q8NHC7 312 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 EPS8L1Q8TE68 723 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 FRS2Q8WU20 508 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 SERAC1Q96JX3 654 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 NAP1L5Q96NT1 182 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 CPXM1Q96SM3 734 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 KDM4CQ9H3R0 1056 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 ERVMER34-1Q9H9K5 563 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 SLC12A6Q9UHW9 1150 aa18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 ANKRD11Q6UB99 2663 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-203ENST00000594298 TMEM131Q92545 1883 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 TLR4O00206 839 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 SLC7A4O43246 635 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 IL1BP01584 269 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 SLC2A3P11169 496 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 ABCB4P21439 1286 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 EPHA8P29322 1005 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 DRD3P35462 400 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 RXRGP48443 463 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 STK19P49842 368 aaPredicted RBP18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 CCDC157Q569K6 752 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 CCAR2Q8N163 923 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 OXR1Q8N573 874 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 C18orf8Q96DM3 657 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 CNDP2Q96KP4 475 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 EDEM3Q9BZQ6 932 aa18.04■□□□□ 0.48
SHKBP1-203ENST00000594298 BAHCC1Q9P281 2608 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 A0A1B0GVM2 712 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 TCAF2A6NFQ2 919 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 HSF2BPO75031 334 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 RFPL3O75679 317 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 MMEP08473 750 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 PDGFRAP16234 1089 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 NUDT1P36639 197 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 PPP2CBP62714 309 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 PPP2CAP67775 309 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 PITX1P78337 314 aaPredicted RBP18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 SLC6A3Q01959 620 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 MTA1Q13330 715 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 RABGAP1LQ5R372 815 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 NAPEPLDQ6IQ20 393 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 CXorf57Q6NSI4 855 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 MFSD2AQ8NA29 543 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 TSC1Q92574 1164 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 IQCDQ96DY2 449 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 SLC2A13Q96QE2 648 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 PPP1R9BQ96SB3 815 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 ARHGAP20Q9P2F6 1191 aa18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 NOCTQ9UK39 431 aaKnown RBP18.03■□□□□ 0.48
SHKBP1-203ENST00000594298 ITPR1Q14643 2758 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3DA0A087WVF3 549 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3IA0A087WXS9 549 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3EA0A087X179 549 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3KA0A087X1G2 549 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3FA6NER0 549 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3LB9A6J9 549 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 PLXNA2O75051 1894 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 ERBB2P04626 1255 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3HP0C7X1 549 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 VAV1P15498 845 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 CCR1P32246 355 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 HNF1BP35680 557 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 GABRB2P47870 512 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 ACADVLP49748 655 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 CDK17Q00537 523 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 OVGP1Q12889 678 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TAF5Q15542 800 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 PTPN20Q4JDL3 420 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 SFMBT2Q5VUG0 894 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 FAM46CQ5VWP2 391 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3GQ6DHY5 549 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 TBC1D3CQ6IPX1 549 aa18.02■□□□□ 0.48
SHKBP1-203ENST00000594298 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms