RNA–Protein interactions for RNA: ENST00000588337.5

KDM4B-205, Transcript of lysine demethylase 4B, human

TSL 5

Gene KDM4B, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM4B-205	ENST00000588337	VPS51	Q9UID3	782 aa		27.58	■■■□□ 2.01
KDM4B-205	ENST00000588337	WASF3	Q9UPY6	502 aa		27.58	■■■□□ 2.01
KDM4B-205	ENST00000588337	FNDC3A	Q9Y2H6	1198 aa	Known RBP	27.58	■■■□□ 2.01
KDM4B-205	ENST00000588337		A0A0D9SEW6	157 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	LRRC72	A6NJI9	287 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	C10orf142	B7Z368	130 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	SH3BP5	O60239	455 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	SRGAP2	O75044	1071 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	SRC	P12931	536 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	SDC4	P31431	198 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	FAM193A	P78312	1265 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	KRT83	P78385	493 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	SIM1	P81133	766 aa	Predicted RBP	27.57	■■■□□ 2
KDM4B-205	ENST00000588337	TEAD4	Q15561	434 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	HLA-B	Q31612	363 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	C6orf118	Q5T5N4	469 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	PHF13	Q86YI8	300 aa	Predicted RBP	27.57	■■■□□ 2
KDM4B-205	ENST00000588337	NAXD	Q8IW45	347 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	DCAF4L2	Q8NA75	395 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	CAMK1G	Q96NX5	476 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	BPIFA3	Q9BQP9	254 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	CEP295	Q9C0D2	2601 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	SPEG	Q15772	3267 aa		27.57	■■■□□ 2
KDM4B-205	ENST00000588337	EPG5	Q9HCE0	2579 aa		27.56	■■■□□ 2
KDM4B-205	ENST00000588337	MT-CO1	P00395	513 aa		27.56	■■■□□ 2
KDM4B-205	ENST00000588337	OR1E1	P30953	314 aa		27.56	■■■□□ 2
KDM4B-205	ENST00000588337	KIF19	Q2TAC6	998 aa		27.56	■■■□□ 2
KDM4B-205	ENST00000588337	CAVIN1	Q6NZI2	390 aa	Known RBP	27.56	■■■□□ 2
KDM4B-205	ENST00000588337	DSG4	Q86SJ6	1040 aa		27.56	■■■□□ 2
KDM4B-205	ENST00000588337	OR14C36	Q8NHC7	312 aa		27.56	■■■□□ 2
KDM4B-205	ENST00000588337	FAM131C	Q96AQ9	280 aa		27.56	■■■□□ 2
KDM4B-205	ENST00000588337	SEPT11	Q9NVA2	429 aa	Known RBP	27.56	■■■□□ 2
KDM4B-205	ENST00000588337	SARDH	Q9UL12	918 aa		27.56	■■■□□ 2
KDM4B-205	ENST00000588337	FRY	Q5TBA9	3013 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337		A0A1W2PPC4	97 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	ALOX15B	O15296	676 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	TOP3B	O95985	862 aa	Known RBP	27.55	■■■□□ 2
KDM4B-205	ENST00000588337	ZNF883	P0CG24	379 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	PTPN9	P43378	593 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	MON1B	Q7L1V2	547 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	STRADA	Q7RTN6	431 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	ATP11C	Q8NB49	1132 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	AGPAT1	Q99943	283 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	ZYG11B	Q9C0D3	744 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	EBF2	Q9HAK2	575 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	TM7SF3	Q9NS93	570 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	PPM1H	Q9ULR3	514 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	ANKRD6	Q9Y2G4	727 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	SNX11	Q9Y5W9	270 aa		27.55	■■■□□ 2
KDM4B-205	ENST00000588337	PLK4	O00444	970 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	MCF2L	O15068	1137 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	TEX33	O43247	280 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	CALB1	P05937	261 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	KRT3	P12035	628 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	HNRNPD	Q14103	355 aa	Known RBP	27.54	■■■□□ 2
KDM4B-205	ENST00000588337	C3orf20	Q8ND61	904 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	OR7D4	Q8NG98	312 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	SLC6A18	Q96N87	628 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	DOCK9	Q9BZ29	2069 aa		27.54	■■■□□ 2
KDM4B-205	ENST00000588337	PPARGC1A	Q9UBK2	798 aa	Known RBP	27.54	■■■□□ 2
KDM4B-205	ENST00000588337	ILVBL	A1L0T0	632 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337		K7ERQ8	282 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	BNIP3L	O60238	219 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	SPINK2	P20155	84 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	GLDC	P23378	1020 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	RRM1	P23921	792 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	RFC1	P35251	1148 aa	Predicted RBP	27.53	■■■□□ 2
KDM4B-205	ENST00000588337	ADRA1B	P35368	520 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	CCR5	P51681	352 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	HDAC4	P56524	1084 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	RACK1	P63244	317 aa	Known RBP	27.53	■■■□□ 2
KDM4B-205	ENST00000588337	ARL13B	Q3SXY8	428 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	POM121L1P	Q3SYA9	428 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	MANEAL	Q5VSG8	457 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	FAM46C	Q5VWP2	391 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	LINGO4	Q6UY18	593 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	27.53	■■■□□ 2
KDM4B-205	ENST00000588337	ZNF783	Q6ZMS7	281 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	PIP4K2C	Q8TBX8	421 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	FAM172A	Q8WUF8	416 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	CENPI	Q92674	756 aa	Predicted RBP	27.53	■■■□□ 2
KDM4B-205	ENST00000588337	SELENOO	Q9BVL4	669 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	CABIN1	Q9Y6J0	2220 aa		27.53	■■■□□ 2
KDM4B-205	ENST00000588337	ASPM	Q8IZT6	3477 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	C1QTNF3-AMACR	E9PGA6	284 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	SLC7A4	O43246	635 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	SMAD6	O43541	496 aa	Known RBP	27.52	■■■□□ 2
KDM4B-205	ENST00000588337	FER	P16591	822 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	PPP2CB	P62714	309 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	PPP2CA	P67775	309 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	NRG1	Q02297	640 aa	Predicted RBP	27.52	■■■□□ 2
KDM4B-205	ENST00000588337	C1QBP	Q07021	282 aa	Known RBP	27.52	■■■□□ 2
KDM4B-205	ENST00000588337	KCNT1	Q5JUK3	1230 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	ADAT2	Q7Z6V5	191 aa	Known RBP	27.52	■■■□□ 2
KDM4B-205	ENST00000588337	DRC7	Q8IY82	874 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	RTN4	Q9NQC3	1192 aa	Known RBP	27.52	■■■□□ 2
KDM4B-205	ENST00000588337	OR12D3	Q9UGF7	316 aa		27.52	■■■□□ 2
KDM4B-205	ENST00000588337	TCRBV5S1A1T	A0A578	114 aa		27.51	■■□□□ 1.99
KDM4B-205	ENST00000588337	SMTNL1	A8MU46	457 aa		27.51	■■□□□ 1.99
KDM4B-205	ENST00000588337	RTN2	O75298	545 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms