RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 OR1G1P47890 313 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 YWHAGP61981 247 aaKnown RBP eCLIP18.71■□□□□ 0.59
SDC2-202ENST00000518385 BASP1P80723 227 aaKnown RBP18.71■□□□□ 0.59
SDC2-202ENST00000518385 TMPRSS15P98073 1019 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 YWHAHQ04917 246 aaPredicted RBP18.71■□□□□ 0.59
SDC2-202ENST00000518385 KBTBD12Q3ZCT8 623 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 PAN2Q504Q3 1202 aaKnown RBP18.71■□□□□ 0.59
SDC2-202ENST00000518385 OTUD1Q5VV17 481 aaPredicted RBP18.71■□□□□ 0.59
SDC2-202ENST00000518385 EP400NLQ6ZTU2 488 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 PDZD4Q76G19 769 aaPredicted RBP18.71■□□□□ 0.59
SDC2-202ENST00000518385 WDR75Q8IWA0 830 aaKnown RBP18.71■□□□□ 0.59
SDC2-202ENST00000518385 WDR60Q8WVS4 1066 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 MRRFQ96E11 262 aaKnown RBP18.71■□□□□ 0.59
SDC2-202ENST00000518385 KCNK16Q96T55 309 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 CCDC106Q9BWC9 280 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 NMUR2Q9GZQ4 415 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 KLC2Q9H0B6 622 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 FBXO6Q9NRD1 293 aaPredicted RBP18.71■□□□□ 0.59
SDC2-202ENST00000518385 NUMBLQ9Y6R0 609 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 COMMD3-BMI1R4GMX3 469 aa18.71■□□□□ 0.59
SDC2-202ENST00000518385 YJEFN3A6XGL0 299 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 TBKBP1A7MCY6 615 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 TRIM49D1C9J1S8 452 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 NRP1O14786 923 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 KCNN4O15554 427 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 EFCAB14O75071 495 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 OAZ2O95190 189 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 ITGB1P05556 798 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 FYNP06241 537 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 LYNP07948 512 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 PRDX6P30041 224 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 ADRA1BP35368 520 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 TUBP50607 506 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 ATXN1P54253 815 aaKnown RBP18.7■□□□□ 0.58
SDC2-202ENST00000518385 TEX44Q53QW1 395 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 SYPL2Q5VXT5 272 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 FAM131BQ86XD5 332 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 NUDCD3Q8IVD9 361 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 ULK2Q8IYT8 1036 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 DCP1BQ8IZD4 617 aaKnown RBP18.7■□□□□ 0.58
SDC2-202ENST00000518385 HASPINQ8TF76 798 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 TOP1MTQ969P6 601 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 QKIQ96PU8 341 aaKnown RBP eCLIP18.7■□□□□ 0.583e-7■■■□□ 14.9
SDC2-202ENST00000518385 PPARGC1AQ9UBK2 798 aaKnown RBP18.7■□□□□ 0.58
SDC2-202ENST00000518385 FBXW11Q9UKB1 542 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 TTLL3Q9Y4R7 772 aa18.7■□□□□ 0.58
SDC2-202ENST00000518385 F8W810 466 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 SYN3O14994 580 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 PEX1O43933 1283 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 CCNT2O60583 730 aaKnown RBP18.69■□□□□ 0.58
SDC2-202ENST00000518385 DGKIO75912 1065 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 ALDH2P05091 517 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 USP17L7P0C7H9 530 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 RBL1P28749 1068 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 ASPHQ12797 758 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 RBM15BQ8NDT2 890 aaKnown RBP18.69■□□□□ 0.58
SDC2-202ENST00000518385 SLC7A14Q8TBB6 771 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 RNF139Q8WU17 664 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 UCMAQ8WVF2 138 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 NDRG1Q92597 394 aaKnown RBP18.69■□□□□ 0.58
SDC2-202ENST00000518385 TMEM175Q9BSA9 504 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 IL23AQ9NPF7 189 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 COL4A4P53420 1690 aaPredicted RBP18.69■□□□□ 0.58
SDC2-202ENST00000518385 LTBP2Q14767 1821 aa18.69■□□□□ 0.58
SDC2-202ENST00000518385 SMIM31A0A1B0GVY4 71 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 GOLGA8RI6L899 631 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 UPP2O95045 317 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 C1QAP02745 245 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 AMHP03971 560 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 BPGMP07738 259 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 NCAM1P13591 858 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 TPSB2P20231 275 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 BDNFP23560 247 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 BST1Q10588 318 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 ITGA9Q13797 1035 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 PAFAH1B3Q15102 231 aaKnown RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 PDK1Q15118 436 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 TPSAB1Q15661 275 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 NFE2Q16621 373 aaPredicted RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 SLC5A9Q2M3M2 681 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 NCBP2-AS2Q69YL0 99 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 RIPOR1Q6ZS17 1223 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 HFE2Q6ZVN8 426 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 SPATA2LQ8IUW3 424 aaPredicted RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 OR10T2Q8NGX3 314 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 FUBP3Q96I24 572 aaKnown RBP eCLIP18.68■□□□□ 0.583e-13■■■■□ 21
SDC2-202ENST00000518385 BTBD9Q96Q07 612 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 COLEC11Q9BWP8 271 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 BRD8Q9H0E9 1235 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 C10orf88Q9H8K7 445 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 PIGVQ9NUD9 493 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 TBC1D30Q9Y2I9 924 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 HBS1LQ9Y450 684 aaKnown RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 FNDC1Q4ZHG4 1894 aaPredicted RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 NCAM2O15394 837 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 TADA2AO75478 443 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 BANF1O75531 89 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 STK10O94804 968 aaKnown RBP18.68■□□□□ 0.58
SDC2-202ENST00000518385 BAIAP3O94812 1187 aa18.68■□□□□ 0.58
SDC2-202ENST00000518385 APOEP02649 317 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms