RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 SYCP3Q8IZU3 236 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 SLC7A5P1Q8MH63 180 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 ABRAQ8N0Z2 381 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 DCLK2Q8N568 766 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 CCDC89Q8N998 374 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 FANCBQ8NB91 859 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 SOCS4Q8WXH5 440 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 CDKL2Q92772 493 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 GLG1Q92896 1179 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 PHKBQ93100 1093 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 HVCN1Q96D96 273 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 SARGQ9BW04 601 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 UPF3BQ9BZI7 483 aaKnown RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 DNAI2Q9GZS0 605 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 ALDH8A1Q9H2A2 487 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 CXorf36Q9H7Y0 433 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 TRIM36Q9NQ86 728 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 DDX21Q9NR30 783 aaKnown RBP eCLIP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZNF212Q9UDV6 495 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 GGA2Q9UJY4 613 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 MRPL11Q9Y3B7 192 aaKnown RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 BZW2Q9Y6E2 419 aaKnown RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 CDY1Q9Y6F8 540 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 FAM169AQ9Y6X4 670 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 SALL3Q9BXA9 1300 aa4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZNF335Q9H4Z2 1342 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P13-201ENST00000511263 ARHGEF10O15013 1369 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 LINC00854A0A1B0GVQ3 168 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 hCG_1984214I3L0E3 225 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 SNX2O60749 519 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 SMIM24O75264 130 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 PIAS2O75928 621 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 IL18RAPO95256 599 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 STAMBPO95630 424 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ANXA2P07355 339 aaKnown RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 TXNP10599 105 aaKnown RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ACVR2AP27037 513 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 IL1R2P27930 398 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ALDH3A1P30838 453 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 MLH1P40692 756 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 CARSP49589 748 aaKnown RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ACADVLP49748 655 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 CPT1AP50416 773 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 PEX5P50542 639 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 CLCN2P51788 898 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 RPS16P62249 146 aaKnown RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 PDE1BQ01064 536 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 DR1Q01658 176 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 POU5F1BQ06416 359 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 TAF11Q15544 211 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 PCID2Q5JVF3 399 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 CWC27Q6UX04 472 aaKnown RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 CCDC121Q6ZUS5 278 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 MAATS1Q7Z4T9 603 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 SKAP1Q86WV1 359 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 MICU3Q86XE3 530 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 RASAL3Q86YV0 1011 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 LURAP1LQ8IV03 231 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 SIRT6Q8N6T7 355 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ANKRD49Q8WVL7 239 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 MAIP1Q8WWC4 291 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 IFT81Q8WYA0 676 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 P3H4Q92791 437 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 TBC1D31Q96DN5 1066 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 IQCDQ96DY2 449 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 C8orf76Q96K31 380 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 TRAPPC9Q96Q05 1148 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 NR1H4Q96RI1 486 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 CCT7Q99832 543 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 TRIM5Q9C035 493 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 KLK15Q9H2R5 256 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 PARVGQ9HBI0 331 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 SEPT11Q9NVA2 429 aaKnown RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 FKBP14Q9NWM8 211 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 BABAM1Q9NWV8 329 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ORC3Q9UBD5 711 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 STK39Q9UEW8 545 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 MTUS1Q9ULD2 1270 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ASAP1Q9ULH1 1129 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ST3GAL5Q9UNP4 418 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 MRPS17Q9Y2R5 130 aaKnown RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 CAPN7Q9Y6W3 813 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 IQSEC2Q5JU85 1478 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 C1orf167Q5SNV9 1468 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 ZNF142P52746 1687 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 SH3TC1Q8TE82 1336 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 A0A1W2PP64 1363 aa4.91□□□□□ -1.62
HMGB3P13-201ENST00000511263 IFT172Q9UG01 1749 aa4.9□□□□□ -1.62
HMGB3P13-201ENST00000511263 IQANK1A0A1B0GTG1 560 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 CPLX1O14810 134 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 TSPAN1O60635 241 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 SRGAP2O75044 1071 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 B3GALNT1O75752 331 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 TJP3O95049 919 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 MYCLP12524 364 aaPredicted RBP4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 TRIM27P14373 513 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 DRD4P21917 467 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 CD9P21926 228 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 HSPA1LP34931 641 aa4.9□□□□□ -1.63
HMGB3P13-201ENST00000511263 CLK3P49761 638 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms