RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 ASB7Q9H672 318 aa18.08■□□□□ 0.49
NUP54-205ENST00000507257 AP4E1Q9UPM8 1137 aa18.08■□□□□ 0.49
NUP54-205ENST00000507257 TCRBV3S1A0A5B6 114 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 KANSL1LA0AUZ9 987 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 PIK3R2O00459 728 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 C2P06681 752 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 NFICP08651 508 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 CXCL8P10145 99 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 PHKA2P46019 1235 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 STAT5BP51692 787 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 PTK2BQ14289 1009 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 STRA8Q7Z7C7 330 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 PSTKQ8IV42 348 aaKnown RBP18.08■□□□□ 0.48
NUP54-205ENST00000507257 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.08■□□□□ 0.48
NUP54-205ENST00000507257 LRRN4Q8WUT4 740 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 PGBD4Q96DM1 585 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 HSPBAP1Q96EW2 488 aa18.08■□□□□ 0.48
NUP54-205ENST00000507257 KCTD15Q96SI1 283 aaPredicted RBP18.08■□□□□ 0.48
NUP54-205ENST00000507257 CFLARO15519 480 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 PIGNO95427 931 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 LTFP02788 710 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 FAM163BP0C2L3 166 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 PTPN1P18031 435 aaKnown RBP18.07■□□□□ 0.48
NUP54-205ENST00000507257 SLC7A1P30825 629 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 NDST1P52848 882 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 CYTH1Q15438 398 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 ZBED5Q49AG3 693 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 ISLR2Q6UXK2 745 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 PACRGLQ8N7B6 248 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 USP13Q92995 863 aaPredicted RBP18.07■□□□□ 0.48
NUP54-205ENST00000507257 FCRL3Q96P31 734 aaPredicted RBP18.07■□□□□ 0.48
NUP54-205ENST00000507257 AGAP3Q96P47 875 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 ACE2Q9BYF1 805 aaPredicted RBP18.07■□□□□ 0.48
NUP54-205ENST00000507257 UNC93B1Q9H1C4 597 aa18.07■□□□□ 0.48
NUP54-205ENST00000507257 A0A087WXM4 84 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 RNF103O00237 685 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 CLASP2O75122 1294 aaKnown RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 FARP2O94887 1054 aaPredicted RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 CHRNGP07510 517 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 PORP16435 677 aaPredicted RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 TTKP33981 857 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 MLH1P40692 756 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 CBX3Q13185 183 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 EEF1DP3Q658K8 133 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 KRT80Q6KB66 452 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 PPP4R4Q6NUP7 873 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 GPR180Q86V85 440 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 TMEM151AQ8N4L1 468 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 ANKFN1Q8N957 763 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 SLC35F5Q8WV83 523 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 ATP6V1E2Q96A05 226 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 SGF29Q96ES7 293 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 HPDLQ96IR7 371 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 TMEM79Q9BSE2 394 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 EFHD1Q9BUP0 239 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 TEX13BQ9BXU2 312 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 MRM3Q9HC36 420 aaKnown RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 COPG1Q9Y678 874 aaKnown RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 MYO18AQ92614 2054 aaKnown RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 A0A1B0GTW7 788 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 TRIM24O15164 1050 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 PAPSS1O43252 624 aaPredicted RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 COL6A2P12110 1019 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 GRIA4P48058 902 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 NDST2P52849 883 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 PSME3P61289 254 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 ESRRGP62508 458 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 MAPRE2Q15555 327 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 KIZQ2M2Z5 673 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 GOLGA7BQ2TAP0 167 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 SLC44A4Q53GD3 710 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 ARL13AQ5H913 290 aaPredicted RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 PMF1Q6P1K2 205 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 SLC26A9Q7LBE3 791 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 FIBCD1Q8N539 461 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 TERB1Q8NA31 727 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 ZNF420Q8TAQ5 688 aaPredicted RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 TMIGD2Q96BF3 282 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 PAIP2BQ9ULR5 123 aaKnown RBP18.06■□□□□ 0.48
NUP54-205ENST00000507257 WDR37Q9Y2I8 494 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 PCDHGA7Q9Y5G6 932 aa18.06■□□□□ 0.48
NUP54-205ENST00000507257 ZCWPW2A0A1B0GU75 182 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 MAGEB16A2A368 324 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 LACTBL1A8MY62 500 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 NEMP1O14524 444 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 MAGEB3O15480 346 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 HTRA2O43464 458 aaPredicted RBP18.05■□□□□ 0.48
NUP54-205ENST00000507257 CYP2C8P10632 490 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 IRF9Q00978 393 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 PLOD1Q02809 727 aaPredicted RBP18.05■□□□□ 0.48
NUP54-205ENST00000507257 TNFAIP2Q03169 654 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 STX5Q13190 355 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 NHSL2Q5HYW2 709 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 JADE1Q6IE81 842 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 STRADAQ7RTN6 431 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 GPR141Q7Z602 305 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 MFSD2AQ8NA29 543 aa18.05■□□□□ 0.48
NUP54-205ENST00000507257 AGBL3Q8NEM8 1001 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms