RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SYNJ2BP-COX16A0A087WUM0 186 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.65□□□□□ -0.06
VARS-228ENST00000495010 NEMP2A6NFY4 417 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 MCF2LO15068 1137 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 MED7O43513 233 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 ATP9BO43861 1147 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 OPA1O60313 960 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 USP12O75317 370 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 AKT2P31751 481 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 GPD2P43304 727 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 CDK17Q00537 523 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 ZNF177Q13360 481 aaPredicted RBP14.65□□□□□ -0.06
VARS-228ENST00000495010 STIM1Q13586 685 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 Q6ZVU0 165 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 KLK6Q92876 244 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 RPRD1AQ96P16 312 aaPredicted RBP14.65□□□□□ -0.06
VARS-228ENST00000495010 OSBPL2Q9H1P3 480 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 UCKL1Q9NWZ5 548 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 COX16Q9P0S2 106 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 VPS28Q9UK41 221 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 ATP6V1DQ9Y5K8 247 aa14.65□□□□□ -0.06
VARS-228ENST00000495010 PTPRQQ9UMZ3 2332 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 A0A1W2PQU0 124 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 TRIM49BA6NDI0 452 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 KPNA3O00505 521 aaPredicted RBP14.64□□□□□ -0.07
VARS-228ENST00000495010 KLK10O43240 276 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 CSO75390 466 aaKnown RBP14.64□□□□□ -0.07
VARS-228ENST00000495010 SMC2O95347 1197 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 CKMT1AP12532 417 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 KRT5P13647 590 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 PRLRP16471 622 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 CCR1P32246 355 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 RPL34P49207 117 aaKnown RBP14.64□□□□□ -0.07
VARS-228ENST00000495010 VASPP50552 380 aaPredicted RBP14.64□□□□□ -0.07
VARS-228ENST00000495010 PMS1P54277 932 aaKnown RBP14.64□□□□□ -0.07
VARS-228ENST00000495010 COBLL1Q53SF7 1204 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 NEK5Q6P3R8 708 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 STK32AQ8WU08 396 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 WBP1Q96G27 269 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 GSDMAQ96QA5 445 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 DUSP23Q9BVJ7 150 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 GTPBP4Q9BZE4 634 aaKnown RBP14.64□□□□□ -0.07
VARS-228ENST00000495010 MUC3BQ9H195 1237 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 THAP9Q9H5L6 903 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 POLR1BQ9H9Y6 1135 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 CPNE5Q9HCH3 593 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 NLGN3Q9NZ94 848 aa14.64□□□□□ -0.07
VARS-228ENST00000495010 E5RJQ4 531 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 PSMA7O14818 248 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 PMM2O15305 246 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 P4HA2O15460 535 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 PIAS2O75928 621 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 PCDH8O95206 1070 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 GP1BAP07359 652 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 HNRNPA2B1P22626 353 aaKnown RBP14.63□□□□□ -0.07
VARS-228ENST00000495010 LSSP48449 732 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 ERVPABLB-1P60509 514 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 KRT83P78385 493 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 GCNT1Q02742 428 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 MTA1Q13330 715 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 CDCP2Q5VXM1 449 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 CXorf57Q6NSI4 855 aaKnown RBP14.63□□□□□ -0.07
VARS-228ENST00000495010 FBXL22Q6P050 247 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 DENND1BQ6P3S1 775 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 PCSK4Q6UW60 755 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 HORMAD1Q86X24 394 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 ARHGEF19Q8IW93 802 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 SH2D3CQ8N5H7 860 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 ATP11CQ8NB49 1132 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 TMEM145Q8NBT3 493 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 MAPK15Q8TD08 544 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 SMARCE1Q969G3 411 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 APOLD1Q96LR9 279 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 CEP63Q96MT8 703 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 PRMT1Q99873 361 aaKnown RBP14.63□□□□□ -0.07
VARS-228ENST00000495010 FEM1AQ9BSK4 669 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 SLC4A5Q9BY07 1137 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 DPH1Q9BZG8 443 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 USP29Q9HBJ7 922 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 FZD3Q9NPG1 666 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 THSD1Q9NS62 852 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 DDIT4Q9NX09 232 aa14.63□□□□□ -0.07
VARS-228ENST00000495010 FLNBO75369 2602 aaKnown RBP14.62□□□□□ -0.07
VARS-228ENST00000495010 DXOO77932 396 aaKnown RBP14.62□□□□□ -0.07
VARS-228ENST00000495010 LETM1O95202 739 aaPredicted RBP14.62□□□□□ -0.07
VARS-228ENST00000495010 IGLV3-25P01717 112 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 RBMS1P29558 406 aaKnown RBP14.62□□□□□ -0.07
VARS-228ENST00000495010 TAS2R38P59533 333 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 CENPCQ03188 943 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 AUHQ13825 339 aaKnown RBP14.62□□□□□ -0.07
VARS-228ENST00000495010 PIP5KL1Q5T9C9 394 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 TMEM110Q86TL2 294 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 EHBP1Q8NDI1 1231 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 OR13H1Q8NG92 308 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 FAM174AQ8TBP5 190 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 HIC2Q96JB3 615 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 DNAJC28Q9NX36 388 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 VANGL2Q9ULK5 521 aa14.62□□□□□ -0.07
VARS-228ENST00000495010 ARID1BQ8NFD5 2236 aaPredicted RBP14.62□□□□□ -0.07
VARS-228ENST00000495010 BPTFQ12830 3046 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms