RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
CPSF4-210ENST00000469897 GABRB2P47870 512 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 NXPH1P58417 271 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 KRT83P78385 493 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 CYP4F3Q08477 520 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 STAT4Q14765 748 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 SLC45A4Q5BKX6 768 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 BRMS1LQ5PSV4 323 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 SMYD5Q6GMV2 418 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 SPATS2Q86XZ4 545 aaKnown RBP13.63□□□□□ -0.23
CPSF4-210ENST00000469897 ZNF683Q8IZ20 524 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 GALNT15Q8N3T1 639 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 ATP11CQ8NB49 1132 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 PIP4K2CQ8TBX8 421 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 NT5C3BQ969T7 300 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 FAM131CQ96AQ9 280 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 TBCBQ99426 244 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 PSMB7Q99436 277 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 KDM4CQ9H3R0 1056 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 CLSTN2Q9H4D0 955 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 SAMSN1Q9NSI8 373 aaKnown RBP13.63□□□□□ -0.23
CPSF4-210ENST00000469897 RRN3Q9NYV6 651 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 MPP6Q9NZW5 540 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 CHMP5Q9NZZ3 219 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 STAP1Q9ULZ2 295 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 FHOD1Q9Y613 1164 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 CFAP47Q6ZTR5 3102 aa13.63□□□□□ -0.23
CPSF4-210ENST00000469897 CACNA1EQ15878 2313 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 A0A0D9SEW6 157 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 GOLGA8SH3BPF8 625 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 ENC1O14682 589 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 SLC7A4O43246 635 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 PLRG1O43660 514 aaKnown RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 SRGAP2O75044 1071 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 RHOCP08134 193 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 ERCC5P28715 1186 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 CDH5P33151 784 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 DNAJC3Q13217 504 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 SMAD1Q15797 465 aaKnown RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 INAVAQ3KP66 663 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 SLC25A52Q3SY17 297 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 FAM102AQ5T9C2 384 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 NAPEPLDQ6IQ20 393 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 LRRC31Q6UY01 552 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 LINGO4Q6UY18 593 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 XYLT1Q86Y38 959 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 MFSD2AQ8NA29 543 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 CPA5Q8WXQ8 436 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 KLK6Q92876 244 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 PGAP3Q96FM1 320 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 CNDP2Q96KP4 475 aaKnown RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 C1orf74Q96LT6 269 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 TPX2Q9ULW0 747 aaKnown RBP13.62□□□□□ -0.23
CPSF4-210ENST00000469897 CA5BQ9Y2D0 317 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 RAXQ9Y2V3 346 aa13.62□□□□□ -0.23
CPSF4-210ENST00000469897 MUC22E2RYF6 1773 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-210ENST00000469897 C1QTNF3-AMACRE9PGA6 284 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 RNF103O00237 685 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 ALOX15BO15296 676 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 SMAD6O43541 496 aaKnown RBP13.61□□□□□ -0.23
CPSF4-210ENST00000469897 RNGTTO60942 597 aaKnown RBP13.61□□□□□ -0.23
CPSF4-210ENST00000469897 ENDOD1O94919 500 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 CTSLP07711 333 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 MMEP08473 750 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 RRM1P23921 792 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 OR1E1P30953 314 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 CHRNA3P32297 505 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 FLT3P36888 993 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 ARRB1P49407 418 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-210ENST00000469897 CLDN6P56747 220 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 TAS2R38P59533 333 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 AGBL4Q5VU57 503 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 TFAP2DQ7Z6R9 452 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 NOP9Q86U38 636 aaKnown RBP13.61□□□□□ -0.23
CPSF4-210ENST00000469897 CHST14Q8NCH0 376 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 OR7D4Q8NG98 312 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 OR2A12Q8NGT7 310 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 SPON2Q9BUD6 331 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 C2orf49Q9BVC5 232 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-210ENST00000469897 NAA15Q9BXJ9 866 aaKnown RBP13.61□□□□□ -0.23
CPSF4-210ENST00000469897 STK33Q9BYT3 514 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 TNKS2Q9H2K2 1166 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 ERVMER34-1Q9H9K5 563 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 VPS51Q9UID3 782 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 TMEM59LQ9UK28 342 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 DMTF1Q9Y222 760 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 HS3ST2Q9Y278 367 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-210ENST00000469897 GPSM3Q9Y4H4 160 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 PCNX2A6NKB5 2137 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 CHD6Q8TD26 2715 aa13.61□□□□□ -0.23
CPSF4-210ENST00000469897 CEP192Q8TEP8 1941 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 E9PAM4 449 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 PRAMEF26H0Y7S4 382 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 KPNA3O00505 521 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-210ENST00000469897 SLC31A1O15431 190 aa13.6□□□□□ -0.23
CPSF4-210ENST00000469897 JUPP14923 745 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms