RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 KRT3P12035 628 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 FERP16591 822 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 GOT1P17174 413 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 OR1E1P30953 314 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 DRD3P35462 400 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 CSNK1EP49674 416 aaKnown RBP19.4■□□□□ 0.7
COL5A1-203ENST00000460264 ZNF165P49910 485 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 METAP1P53582 386 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 ADPRHP54922 357 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 KRT83P78385 493 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 SHC2P98077 582 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 SLC14A1Q13336 389 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 STRADAQ7RTN6 431 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 DSG4Q86SJ6 1040 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 C3orf20Q8ND61 904 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 OR2T34Q8NGX1 318 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 OR8D1Q8WZ84 308 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 BAP1Q92560 729 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 FUCA2Q9BTY2 467 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 ZYG11BQ9C0D3 744 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 PPARGC1AQ9UBK2 798 aaKnown RBP19.4■□□□□ 0.7
COL5A1-203ENST00000460264 ANGPTL2Q9UKU9 493 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 EPG5Q9HCE0 2579 aa19.4■□□□□ 0.7
COL5A1-203ENST00000460264 MAP1BP46821 2468 aaKnown RBP19.39■□□□□ 0.69
COL5A1-203ENST00000460264 LRRC72A6NJI9 287 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 ALOX15BO15296 676 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 CER1O95813 267 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 MT-CO1P00395 513 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 SRCP12931 536 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 RFC1P35251 1148 aaPredicted RBP19.39■□□□□ 0.69
COL5A1-203ENST00000460264 ADRA1BP35368 520 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 GRIA4P48058 902 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 HDAC4P56524 1084 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 NRG1Q02297 640 aaPredicted RBP19.39■□□□□ 0.69
COL5A1-203ENST00000460264 C1QBPQ07021 282 aaKnown RBP19.39■□□□□ 0.69
COL5A1-203ENST00000460264 ARL13BQ3SXY8 428 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 MANEALQ5VSG8 457 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 IL27RAQ6UWB1 636 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 CENPIQ92674 756 aaPredicted RBP19.39■□□□□ 0.69
COL5A1-203ENST00000460264 FAM131CQ96AQ9 280 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 SYT11Q9BT88 431 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 SELENOOQ9BVL4 669 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 IL21RQ9HBE5 538 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 SARDHQ9UL12 918 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 MYO6Q9UM54 1294 aa19.39■□□□□ 0.69
COL5A1-203ENST00000460264 TCRBV5S1A1TA0A578 114 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 ILVBLA1L0T0 632 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 K7ERQ8 282 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 MCF2LO15068 1137 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 CCDC172P0C7W6 258 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 TEAD4Q15561 434 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 LAYNQ6UX15 382 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 ZNF783Q6ZMS7 281 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 IRF2BP2Q7Z5L9 587 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 ATP11CQ8NB49 1132 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 OR7D4Q8NG98 312 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 FAM172AQ8WUF8 416 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 GAREM1Q9H706 876 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 OR12D3Q9UGF7 316 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 PPM1HQ9ULR3 514 aa19.38■□□□□ 0.69
COL5A1-203ENST00000460264 FNDC3AQ9Y2H6 1198 aaKnown RBP19.38■□□□□ 0.69
COL5A1-203ENST00000460264 SPAARA0A1B0GVQ0 90 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 SIGLEC16A6NMB1 481 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 PLK4O00444 970 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 ZNF883P0CG24 379 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 GPD1P21695 349 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 GLDCP23378 1020 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 RRM1P23921 792 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 CCR5P51681 352 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 CLCN6P51797 869 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 IQCB1Q15051 598 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 KIF19Q2TAC6 998 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 HLA-BQ31612 363 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 FILIP1LQ4L180 1135 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 FAM46CQ5VWP2 391 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 DNAJC24Q6P3W2 148 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 WDR59Q6PJI9 974 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 LINGO4Q6UY18 593 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 NAXDQ8IW45 347 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 DRC7Q8IY82 874 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 CCDC185Q8N715 623 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 OR14C36Q8NHC7 312 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 PIP4K2CQ8TBX8 421 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 OSBPL2Q9H1P3 480 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 WASF3Q9UPY6 502 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 NEU3Q9UQ49 428 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 CABIN1Q9Y6J0 2220 aa19.37■□□□□ 0.69
COL5A1-203ENST00000460264 DOCK9Q9BZ29 2069 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 A0A1B0GTH6 734 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 A0A1W2PPC4 97 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 LRRC53A6NM62 1247 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 C1QTNF3-AMACRE9PGA6 284 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 FAM72CH0Y354 149 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 CBX4O00257 560 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 SLC7A4O43246 635 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 SMAD6O43541 496 aaKnown RBP19.36■□□□□ 0.69
COL5A1-203ENST00000460264 BNIP3LO60238 219 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 SH3BP5O60239 455 aa19.36■□□□□ 0.69
COL5A1-203ENST00000460264 RACK1P63244 317 aaKnown RBP19.36■□□□□ 0.69
COL5A1-203ENST00000460264 SIM1P81133 766 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms